Bipolaris sorokiniana: COCSADRAFT_109876
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Entry
COCSADRAFT_109876 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K23358
transcription initiation factor TFIID subunit 1, fungi type [EC:
2.3.1.48
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSADRAFT_109876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_109876
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_109876
Enzymes [BR:
bsc01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
COCSADRAFT_109876
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCSADRAFT_109876
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
COCSADRAFT_109876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
zf-CCHC
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
19130106
NCBI-ProteinID:
XP_007696355
JGI:
Cocsa1_109876
UniProt:
M2T320
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MDDEHNPTASSHSDAAEDEDFARIMRQAQMGAAEGEEDLLSGIASRPLEAGEKADDAVDY
EDIGDDDLPEEEFESGGGDDAGINFSGTTMQDSGGTLDNGDVDMDDLFGDGDAQDDLFGD
DPDHSDPTRENTQHKDDPLTSIEDLVQEGFNMASQDKSQQSNRTNAQTATQEEEDEEEDP
EVREQLALFAQSLRKKDEMADAPKKTSREEFEKIWPNFEADKPPRFFSLVPRKRAFYIPK
IPPKAPRPFQMNKLTLDIAPDQEKSFRLHPTTTTKSGRQQEEEQGGIIQITSTTEDDGDG
NEQMDFDHFDTIDDHEMIGNVSWSNLRIACEDWEVPDDSNAAILSENGQAPTPPDSINAG
QSPNKKRRLGDHDQPIQFSVYDHMDLPTWDDPELETAKLSKKILLDMNDPHLLLDVQQPS
AEPPKPRTLGLGLKRDSRGSLANPMFKRYNISNDEAYDALKESSQQKVRSTIGHMNVEHS
LPALKLQYPFYKVALSDRELRSFHRPTITFKPGERASISSLKSVKRKHKKNLKPSEAFAT
AEDLNIGDNSDLLLAEYSEEYPTTLSNFGMGIKILNYYRRKDMEDTARPKPEDGIGETSI
LLPQDKSPFSLFGQVEPGQQVLTLHNAMYRAPVFKHKPEETDFLVSRSWTGVNGPRYYMR
TIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRKGQQRGARQPWVSNEMIK
QHLPGTEIAQNRSRMREIMKYQKDIGTWEPVPGETVPEEPILRTWIKPEDVCLIDSMHAG
DKQLQDAGIKSNEIRDDDDEADNENADVKLAPWNTTKNFLNACAGKAMLELHGEGDPTGQ
GLGFSFIKVSMKGGFRDVGESAADRLDSKKMKELGGHSYNVQRQQVMYENAIKRIWNKQK
ESLSAQNPPSDTEDDVDTAVPRNNLPRQRSEMGTPATMRHDDETMSQMSRNSNADNRGKK
LKITRTIKNKYDEYEDVTEIITDPAVIQLYIKHKRQERLLNMRIEDIKPTGDPEVDKAQQ
IKLKAELARLARNIERREGREKAKGLHKSQTGEGGVTGGPGKGGATPRKCANCGEVGHIK
TNKKLCPLLNGQRKQNDTFKDANAASPATATVPATPSFAGSPS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcacaacccaacggcgagcagccacagcgacgcagcggaggatgaagac
ttcgcaagaatcatgcgccaggcgcagatgggggcggcggaaggcgaagaagacttgcta
agtggcatcgcttcgcgtccacttgaggctggcgaaaaggcggatgatgccgtggattac
gaggatattggcgatgatgatctgcctgaagaagagtttgagtcgggtggaggcgacgac
gctggtatcaactttagcggaaccacaatgcaggactccggtggcacactcgataacggc
gatgtggatatggatgatttgtttggcgatggcgatgcacaggacgaccttttcggtgat
gacccagatcattcagatcctacacgggaaaacacacaacacaaagacgacccacttaca
tccatcgaggatctagtccaagaaggcttcaacatggctagtcaggacaaatcgcaacag
agcaaccgcaccaatgcacagacggcgactcaggaggaagaggacgaggaggaagaccca
gaagtgcgcgagcagttggccctgttcgcccagtctcttcgcaagaaggacgagatggcg
gatgcacctaaaaagacatcaagagaggaatttgagaagatttggcccaacttcgaggca
gacaaaccgccacgtttcttcagccttgtaccacgaaaacgcgccttctacatcccaaaa
atcccgccaaaggcaccaaggcctttccaaatgaacaaacttactctggatatcgcaccg
gaccaagagaagagttttcgattacatcccacaaccaccaccaagtccggtcggcaacaa
gaggaggagcaaggcggaatcatacagatcacgagcactacagaagatgacggtgatggg
aacgagcagatggatttcgatcacttcgatacaattgacgatcacgaaatgattggcaat
gtatcatggagtaatctcagaattgcctgtgaggactgggaagttccagatgactcaaac
gctgcaatcctttccgagaatggccaagcaccaactccacctgatagtatcaatgctggg
cagtcaccgaacaagaaacgcaggctcggagaccacgaccagcccattcaattttctgtg
tacgatcacatggatttgcccacttgggacgatcctgagctggagacggcgaagctgtca
aagaagattctcttggacatgaacgaccctcatctcctgttggatgtacagcagccgagt
gcagagcctccaaagcctcgaacgttgggtctaggactcaagcgtgatagtcgcggtagt
cttgcgaaccccatgttcaagcgctacaatatttccaatgatgaggcatacgacgcgctc
aaggagagcagccaacagaaggtccgtagtaccattggacacatgaatgttgagcacagt
ctgcccgcactgaagttgcagtaccctttctacaaggttgcactttccgatcgcgagctt
cgatctttccatcggcccaccatcacattcaagcctggtgagcgagccagtatctcgtca
ctcaagtctgtcaagaggaagcacaagaaaaacctcaagccatccgaggccttcgccacc
gcagaagatctcaacattggtgacaactcagatctcctcctcgccgaatactccgaggaa
taccctaccactttgtccaactttggcatgggtatcaagatccttaattactaccggcgg
aaagacatggaagatacggcacgtccgaagccggaagatggaattggagaaacttcgatt
ctgttaccgcaggataagagtcctttctctctgtttggccaagttgagccaggccagcag
gtactgacgctccataacgccatgtatagagcgccagtgttcaagcacaagcctgaagag
accgatttccttgttagcagaagctggactggggttaatggccccagatactacatgcga
actattcccaaccttatggtggttggtcagcagttcccatccgtcgaagtgcctggtaca
catgcccgaaaggttactgaagcatcgaagaagcgactcaagatgctggcgttcagattg
taccgaaagggacaacagagaggagcgcgacaaccttgggttagtaacgaaatgatcaag
cagcatcttcccggtactgaaattgcgcaaaatcgctctcgaatgcgcgaaatcatgaag
tatcaaaaggacattggtacttgggagcctgtgcctggcgagactgtgcccgaagagcca
attctgcgcacttggataaagccggaagacgtttgtcttatcgactccatgcatgctggt
gacaagcagcttcaggatgccggtatcaagtcgaatgagatccgtgatgatgacgatgaa
gcagacaatgagaacgccgatgtcaagttggcaccatggaacaccacgaagaacttctta
aatgcatgtgccggtaaggctatgctggagcttcatggagaaggtgaccctactggacaa
ggcttgggttttagtttcatcaaggtttcgatgaagggtggctttagggatgttggtgag
agtgcagctgatcgacttgatagcaagaagatgaaggaactcggcggtcacagctacaat
gtacaacgccagcaggttatgtatgagaacgctatcaagcgtatttggaataagcagaag
gagagtttgtctgctcagaatccgccttccgataccgaggacgatgtcgacacagccgtg
cctcgcaacaacctcccacgtcaacgctctgagatgggaacgccagctacaatgcggcat
gatgacgagacaatgtcgcaaatgtctcgcaatagcaatgcagacaaccgcggcaagaag
ctcaagatcacgcgtaccatcaagaacaagtacgatgagtatgaggacgtcacggaaatt
atcacagatccagctgtcattcaactttacatcaagcacaagcgccaagagcgtctgttg
aacatgcgtatcgaagacatcaagcctaccggcgaccccgaagtagacaaggctcagcag
atcaagctcaaagccgaactcgcccgtctcgcccgcaacatagagcgtcgcgagggtcgc
gaaaaggcaaagggcctacacaaatcgcagacaggcgaaggaggcgtaaccggtggacca
ggaaagggcggagcaacacctcgcaagtgcgcaaactgcggcgaggttggccacatcaag
acgaacaaaaagctttgtcctctcctcaatggccagaggaaacaaaatgacactttcaag
gatgcgaatgctgcgtcgccggctactgcgactgttcctgccactccttcttttgccggt
tcgccgtcttga
DBGET
integrated database retrieval system