Bipolaris sorokiniana: COCSADRAFT_110306
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Entry
COCSADRAFT_110306 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14791
periodic tryptophan protein 1
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_110306
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
90S particles
Other 90S particles
COCSADRAFT_110306
Pre-60S particles
Other pre-60S particles
COCSADRAFT_110306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_Aladin
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
Beta-prop_Nup120_160
Beta-prop_WDR41
WWE_1
Motif
Other DBs
NCBI-GeneID:
19130118
NCBI-ProteinID:
XP_007696747
JGI:
Cocsa1_110306
UniProt:
M2TE01
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MSMITATTWVPRGFAAPFPTRYQFDEEEYERISKLANLQLEDAKEELEEAQAEEKAKSNG
TSSKAQKKDDDDDDDDLKEYDLEHYDDEVAQDQGDTMAMFGNAKNLVFHENDEDDPYITM
KGGDEEDEEDREELQILATDNLVLAGRIEDEVAHLEVYVYEDEDDNLYVHHDIMLPAIPL
AVEWLDLPVGKSVGTSEGKGNFVAIGTMDPDIEIWNLDVVDSMYPDAVLGQGADDATKAD
KPKKKKKKSRKANDEFHVDSVLSLAANRHHRNLLASSSADKTIKLWDLNTTKCAKSYTYH
TDKVCSVAWHPVESTALLSGSYDRTVVVADMRAPEAKAPRWGVESDVESVRWNPHDPNYF
YVSTENGMIHYHDARNAPKDASASKPVWVLQAHDESISSFDINPVIPGYLATGSTDKQVK
LWNIQESGPSMVVSRDLGVGKVFSTSFAPDNEVGFRLAVAGSKGAVQIWDTSTNAAVRAA
FASKVPAVRGDGKERLVGLEEEDTDSDSEEGESNDEEGEDGDDKGWESMEE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgatcacagcgacgacatgggtgccgcgtggctttgcggcgcctttccctacc
aggtaccaattcgacgaggaagaatatgagcgcatatcgaaacttgcaaatctacagctg
gaagacgctaaggaagaacttgaagaggcgcaagctgaggagaaggctaagagcaacgga
acttcaagcaaagcacagaaaaaagatgacgacgacgatgacgacgatctcaaagaatac
gaccttgagcactacgacgatgaagtcgcccaggaccaaggcgacactatggccatgttc
ggcaacgcaaagaacctagtgttccacgagaacgacgaagacgacccgtacatcaccatg
aagggtggagatgaagaggatgaggaggatcgagaagagctacagattctggccacagac
aacctggtattggctggaaggatagaagacgaagttgcacatcttgaggtctatgtgtac
gaagacgaggacgataatctctacgtacatcacgacattatgctgcctgccatcccactg
gctgttgagtggctagatctgcccgtaggcaaatctgtgggtaccagcgaaggcaagggt
aactttgtagccatcggaactatggacccagatattgagatttggaatttggacgtggtg
gacagcatgtacccagatgcggtactaggacaaggtgctgacgatgcgacaaaggccgac
aagcccaagaaaaagaagaagaagtccaggaaggccaacgacgagttccacgttgactct
gtactctcgctcgcggccaaccgccaccaccgcaaccttcttgcttcgtcgtcggctgat
aaaaccatcaagctatgggacttgaacacgaccaaatgcgcaaagtcatacacgtatcac
acagacaaggtgtgctctgtagcatggcaccctgtcgagtctactgcgcttctgagtggt
agctacgaccgcacagtggtggtagccgatatgcgtgcacccgaggcaaaagcaccacgg
tggggcgttgagagtgatgtcgaaagcgtgcggtggaatcctcacgacccgaactatttc
tatgtctcgactgaaaacggcatgatacactatcacgatgctcgcaacgcaccaaaagat
gcgtctgcctcaaaacctgtgtgggtattacaggcccatgacgagtctatttcgtcgttt
gacatcaacccggtgatacctggttacttggcaacgggctctacggataagcaagtaaaa
ctgtggaacattcaagaaagcgggccgagcatggtggtgtcgcgagacttgggcgtgggc
aaggtcttctccacatcctttgcccctgataacgaagtgggtttccgactggcagtagca
ggaagcaaaggcgccgtgcagatttgggatacgagcaccaatgcagcggtgcgtgcagct
tttgccagcaaggtgcctgcagttaggggagatggcaaggagcgtctcgtgggtctggaa
gaggaagacacggattctgattcggaagaaggagagagcaatgacgaggaaggggaggat
ggtgatgacaagggatgggagtcgatggaggagtag
DBGET
integrated database retrieval system