Bipolaris sorokiniana: COCSADRAFT_118766
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Entry
COCSADRAFT_118766 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCSADRAFT_118766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_118766
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
COCSADRAFT_118766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
IFN-gamma
Motif
Other DBs
NCBI-GeneID:
19130394
NCBI-ProteinID:
XP_007700699
JGI:
Cocsa1_118766
UniProt:
M2T3S7
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MASRPEIKEEDESGFCKFFRNLDEKDNETVRIFDRGDYYSAHGEDAKFIANTVYKTTAVI
RKLGREPGLESVTMTVTVFRNFLRDALFRLSKRIEIWQSTGKRMDWKVVKQASPGNLQDL
EDELGGQIESAPIILAVKVSAKASEARRVGVCFADASVRELGVSEFLDNDLYSNFESLLI
QLGVKECLVQLDSTKKDVELSKLRTIADNCGCAVAERAPADFGTKDIEQDLPRLLKDDRA
AGSLPLTDQKLAMGSAACLIRYLGVMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNLMP
GPRDGAKNMSLYGLLNHCKTPTGSRLLAQWLKQPLMNLSDIERRQQLVEAFVNDTELRQT
MQEEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVVIRLPGFLSALEAVIDEQYKEPLDA
EYTEKLRQYTTAFAGLQDMVETTVDLEALDNHEFIIKPEFDESLKTIRKRLDKLKRDMES
EHMRVGDDLNQDTEKKLFLENHKVNGWCFRLTRNEAGCIRQKKQYQEISTQKNGVYFTTN
TLQEKRREFDQLSENYNRTQAGLVNEVVSVASSYVPVIEKLAAVLAHLDVIVAFAHVSVH
APTSYTRPKMHPRGTGDTVLKEARHPCMEMQDDISFITNDVSLVRNKSEFLIITGPNMGG
KSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQIKGVSTFMAEMLETAN
ILKSATKESLIIIDELGRGTSTYDGFGLAWAISEYIIKEIGAFALFATHFHELTALTDTY
PQVQNLHVVAHISEGSSAADDDGDVDMENAAAQKKREVTLLYKVEPGFSDQSFGIHVAEL
VRFPQKVINMAKRKADELEDFSGKHEEGFVQASKEEVEDGSRLLKEVLVEWKKEVESKGL
TKKQQVERMRELVKANEKLMANGFFKSIQAL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagaccagagatcaaggaggaggatgagtctggtttctgcaagttctttcgc
aatctggacgaaaaggacaatgagacggtgcgcatattcgaccgtggcgactattacagc
gcccacggcgaggatgctaagttcattgcgaacactgtctacaaaaccacagccgtaatc
cgcaagctgggacgagaaccaggactcgagtccgtcacaatgaccgtcaccgttttccgc
aacttcctccgagacgctctattccgactcagcaaacgcattgagatatggcagtcaaca
ggcaagcgcatggactggaaggttgtcaaacaagcctcacccggcaacctacaagatctg
gaggatgagctgggtggtcagattgagagtgcccctataatattggcggtcaaagtatcg
gccaaggcatcggaagcacggagggtgggtgtatgctttgccgacgcaagtgtacgggag
ttgggcgtttcagagttccttgacaacgacctctattcaaacttcgagtcactcctcatc
cagctgggtgtgaaggagtgtctggtacaactcgactcaacgaagaaggatgtcgagctc
agcaagcttcggactattgccgacaactgcgggtgtgcagtggcagagcgagcaccggcc
gactttggcacaaaagatatcgagcaagacttgcctcggttgctcaaggatgatcgtgct
gctggttcactgcctttgacagaccagaagctggccatgggctcagctgcgtgtctgatc
cggtatctgggcgtcatgtctgattcatcaaactttggacaatatcagctctatcaacac
gacctgtcacaatatatgaagcttgatgcggctgcgctgaaagcactgaacctcatgcct
ggaccacgagatggtgccaagaacatgagtttgtatggtctgctcaatcactgcaaaaca
ccgaccggcagtcgattactagcacaatggctcaagcagccactgatgaaccttagcgat
attgaacgacggcagcagctggttgaagcgtttgttaatgataccgaactgaggcagacc
atgcaagaagagcatctgcgctcgatacccgacctatatcggctagcaaagaagtttcag
cgcaaggcagctaacttggaagacgttgtacgggcataccaagttgtcattcggttaccg
ggcttcctcagcgctctcgaggcagtcattgacgagcaatacaaagagccacttgacgca
gaatatacggagaagctccgtcaatacaccacagcgtttgcgggcctgcaagacatggtg
gagacgacggttgatttggaggctcttgacaaccatgaattcattatcaagccagagttt
gatgaatcgctaaagaccatccgtaagcgtctggataagctgaagcgcgacatggagtct
gagcatatgcgtgtgggcgacgacctcaatcaagacactgagaagaagctcttccttgaa
aaccacaaagtcaacggctggtgcttccgtctgacgcgcaacgaagcgggttgcattcga
caaaagaagcaataccaagaaatctcgacacagaagaacggtgtctacttcacaacaaac
acccttcaagaaaagcgcagagagtttgaccagttgtctgaaaattacaaccgcacacag
gcaggtctggtcaacgaagtcgtctctgtagcttcatcctacgtccctgtcatcgagaag
ctcgccgcggtgcttgcacacctcgatgtcattgtcgcctttgcacacgtctctgttcat
gcgccaacctcgtacacacggcccaagatgcacccacgaggcaccggcgacacagttctc
aaagaagcgcgacacccatgtatggaaatgcaagacgacatctccttcatcacaaatgac
gtctccctggtccgaaacaagagcgaattcctcatcattacaggacccaatatgggcggt
aaatcgacctacatccgccaaatcggcgtcatcgccctcatggcgcaaatcggctgcttc
gtcccctgttcagaagccgagcttaccattttcgactgcatactcgcacgtgtgggcgcc
agcgacagccaaatcaaaggtgtatccaccttcatggccgaaatgctcgaaacggccaat
atcctcaaatcggctaccaaggaatccctcatcatcatcgatgagctgggccgtggaaca
agtacgtacgacggattcggactggcatgggccatttcagagtacatcatcaaggagatt
ggggcgtttgccttgtttgcgacgcatttccacgaattgaccgcgctcacggacacgtat
ccgcaggtccagaacctgcacgtcgtagcgcatatctccgagggcagcagcgcagccgac
gacgatggcgatgtagacatggagaatgcggctgcgcagaagaaacgcgaagtcacgctt
ctctacaaggtggaaccgggtttctccgaccagtcttttggtattcacgttgcggagctg
gtgcgcttcccgcaaaaagtcattaatatggcgaagcgcaaggcggacgagcttgaagac
ttttctggaaagcatgaagaggggtttgtgcaggcgagtaaagaggaggttgaggatggg
agtcgcttgctgaaagaggtgcttgtggagtggaaaaaggaggtggagagtaaggggttg
acgaagaagcagcaagtggagcggatgagggagttggtcaaggcgaatgagaagttgatg
gcgaatgggtttttcaagagcatccaggcgctgtga
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