Bipolaris sorokiniana: COCSADRAFT_120278
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Entry
COCSADRAFT_120278 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12190
ESCRT-II complex subunit VPS36
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
COCSADRAFT_120278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bsc04131
]
COCSADRAFT_120278
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bsc04147
]
COCSADRAFT_120278
Membrane trafficking [BR:
bsc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
COCSADRAFT_120278
Exosome [BR:
bsc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSADRAFT_120278
Exosomal proteins of colorectal cancer cells
COCSADRAFT_120278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36-NZF-N
Vps36_ESCRT-II
zf-Sec23_Sec24
Zn_ribbon_RanBP
EutK_C
DZR
Motif
Other DBs
NCBI-GeneID:
19130441
NCBI-ProteinID:
XP_007701389
JGI:
Cocsa1_120278
UniProt:
M2S7R5
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MFLHQLDLTTALRPSLLPEETLLFVQDAVGLYEGKFKIPEYQNGQSYLTSHRVCYVDHDE
PRKNSVAIFLKDVEKPEFYAGFLKSSPKVTLYPKPLKQLSRGAPLAPTPTASSSSTPPRH
SSPAPPPPASATWVCPICSFSNPVPSNFDPALASRTPIPPCLACGIKPPTVHVVKAAIAA
MSNRPAPGPPPKDVKNGTPPPPPSASTTSPSACPRCTYQNHPSLLNCEICGASLTTAVDK
RLDMLQEPTRSQSPGPTLSSPLQSDTIECIKLSFRAGGGPIFYERLKNALVQRKWLLQSA
PPIPKPRLASVIADNGYTIQSDASSIESERPRVVGIAGLERRGLEQRQNNEAMIGSAFED
LEALMTSAKEIIALAEQFASQANLGTNSSSEANALASQSASALGLVTTKDMLGSGSGSES
LYVSELSRNLAEWLTDDTHGILRKEGGIMTLVDLWAVFNRARGGVELVSPSDFEKAARMW
DTLKLPVRLRQFKSGLLVVQGRDRTDEKTIASLLAWFKTLHQEPPSMEVTWDWQTFGRGA
TAQEAAERFGWSVGVATEELEMAEEAGALCREQGIDGFRFWENWLVKMPGNVTVT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgcaccagctcgacctcaccaccgcactgcgcccgtcgctcctgccggaggag
acgctgctttttgtccaagatgctgtagggctctacgaggggaagttcaagatacccgag
tatcaaaacgggcagtcgtatctgacctcacaccgcgtctgctatgtcgaccacgatgag
ccgcgcaagaactccgtcgccatcttcctgaaagatgtcgagaaaccagagttctatgct
ggttttctcaagtcgtcgcccaaggtaactctctacccgaagcccttgaagcagctgtcg
cgaggtgctcctttggctcccacgccaaccgcctcgtcctcttctactccgccgcggcac
agcagccccgcgcctccacctcctgcgagcgcaacatgggtgtgcccgatatgctccttt
tccaaccccgtgccttccaacttcgaccccgctctcgcatctcgcacacccataccgcca
tgtctcgcttgcggaataaagccgccgactgtacatgttgtcaaagcagccatagcggcc
atgtcgaatcgaccagcccctggcccgcctccgaaagatgtgaagaatggaacccctcct
cctcctccttcggcttctacaacatcgccatcggcatgccctcgttgcacctaccagaac
catccttctctcctcaattgcgagatttgcggtgcatccctgacaacggccgtagacaag
cgcttggatatgcttcaggagcccaccaggtcccaatctccaggcccaacactctcgtcg
ccattgcagtccgacaccatcgaatgcatcaagctatctttccgtgctggtggggggcct
atattttacgaacgcctaaagaatgcactggtgcagcgcaaatggctccttcaaagtgcc
ccgccaattcctaagccacggctggcctctgttatagctgacaatggctacactatacaa
tctgacgcttcgtctatagaatctgaacgaccccgagttgttggtattgcgggtttagag
cgacgcggactagagcagagacagaacaacgaggccatgataggcagcgcctttgaggac
cttgaggcgctaatgacatcagcaaaagagattatcgctcttgcagaacaatttgcatca
caggccaacttgggcactaatagcagctctgaggcaaacgcattagcatcacagtcagcg
tctgcactaggtctcgttacgacaaaggacatgcttggttctgggtcaggttctgagtcg
ctgtatgtgtcggagctttcgagaaatctggctgagtggctcacggatgacacgcatggt
atcctgcgaaaagaaggtggcatcatgacgcttgtagatctttgggctgtcttcaatcgt
gcaaggggcggtgtcgaacttgttagtccgtcagattttgagaaggcagcgcgcatgtgg
gatacgttaaaattgccagtacgtctaaggcaattcaagagcggtcttctagtcgtacaa
ggacgtgatcgcactgacgagaaaaccattgccagtctcctggcatggttcaagactctt
caccaagagcctcctagcatggaagtcacatgggattggcagacatttggcaggggcgca
acagcgcaagaggcagctgaaagatttggttggagtgttggtgtcgcgacagaagagcta
gaaatggctgaggaagcgggtgcactctgtcgagagcagggaattgacggattcaggttt
tgggagaactggctggttaagatgccagggaatgttacagtgacttga
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