Bipolaris sorokiniana: COCSADRAFT_120840
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Entry
COCSADRAFT_120840 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCSADRAFT_120840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_120840
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_120840
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
COCSADRAFT_120840
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
COCSADRAFT_120840
PBAF complex
COCSADRAFT_120840
GBAF(ncBAF) complex
COCSADRAFT_120840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
19130462
NCBI-ProteinID:
XP_007701717
JGI:
Cocsa1_120840
UniProt:
M2SZD1
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MADDATTSASAQDPTLSGEGTADSNALDQDTNMLEDTAVKASSNEPATATPAAASDNPLD
APDAPRPEAEDADGQEDEEMGGTDDAKKEGESAEAADPEAQAKADLQSAARSHFVTQTYA
TIIPSYATWFDMRYIDYRERKALPEFFNNRNRSKTPAVYRDYRDFMINTYRLNPSEYLTV
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDPQERPSNIGPPFTGHFRVTVDTPRGLQP
FQPGPGSKVTEGKQLVATDRAASQQPLAKSETKSLAGRNIYEPNGKEASVEPKAANGEAA
ANGGSVDVKDLEAAAKEPTKVINCFSCGVECTRVHFHETKPSEQPGQLKAAGGLKRDLCP
RCFVEGNFPSGTSSADFTKISNPEDLAATETEEKWTEEETLLLLEGLEEFDDDWNRVADH
VQTKTREQCVMKFLQLEIEDKYVEADLPESQSAAPSTKFLRDLEYLSEGRVPIHHADNPI
LSVVSFLAGLAPANVTEAAVASGRSVNEMKRILQEKINKAPTAPSEKGKEKEGEQSTPAA
SASDMKPEGGDAMDIDTSAESTAVATKEVDSSSGGNPLATLPFALSAARSSALASHEERH
ITRLVSGAVNLQLQKLQLKLAHFNDFEKLLSAERRDLQRRRQQLFMDRLNFQRRVRALED
ATKKISSSMGDQGLPGSMSNEDAVQALTEAIRMFGVGKGEDSMGVKRDSVDAGVVMPVAE
AAEGYGKIEI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgcaacaacaagcgcatccgcccaggaccccaccctttctggagaaggc
accgcagacagcaatgcgcttgatcaagacacaaacatgctcgaagacactgccgtcaag
gcgtcgtcaaatgagcccgcgactgcaacacctgctgctgcatccgacaaccctctagac
gcacccgacgcaccacggccggaagccgaagatgcggatggtcaagaggatgaagaaatg
ggcggcaccgacgatgcaaagaaggagggcgaaagcgccgaagctgcggatcccgaagca
caagcaaaagccgatttgcaatcggcagcacgctcccactttgtcacgcagacttatgcg
accattatcccaagctacgcgacttggtttgacatgcgctacattgactaccgcgagcgc
aaggcgctgccagagttcttcaacaaccgtaatcgcagcaagaccccggccgtctaccgc
gactaccgtgatttcatgatcaacacataccgcctcaacccatccgagtacctcacagtc
accgcatgccgaaggaatctcgctggagacgtgtgcgccatcatgcgtgtacacgccttc
ctcgaacagtgggggttgattaattatcaggttgacccgcaggaacgcccatcgaacatt
ggcccacccttcaccggccacttccgcgtcacagtcgacaccccccgtggactccagccc
ttccaaccaggaccaggctcaaaagtgacagagggcaagcaactcgtagcgactgaccgc
gccgcaagccaacaacctcttgcaaagagcgagaccaagtctctagcgggccgaaacatc
tacgagcccaatggcaaggaggcttccgtagaacccaaggctgcaaacggagaagcggct
gcaaacggcggatcagttgacgtcaaggacctcgaggctgccgccaaagagccaaccaag
gtcatcaactgcttcagctgcggtgtcgaatgcacacgtgtacatttccatgagacgaaa
ccctctgagcagccaggacagctcaaggctgctggaggtctgaagcgggatctgtgcccc
aggtgtttcgtagagggcaactttccatccggcacatcatcagcagacttcaccaagatc
tcgaatccagaggatttggcagctaccgagaccgaggagaagtggaccgaagaagagacc
ctcttgctacttgaggggttggaggagtttgatgacgactggaatcgtgttgcagaccac
gttcaaacaaagactcgcgaacagtgtgtgatgaaattcctacaactcgagattgaggac
aagtacgtcgaagcagatctaccagagtcacaatccgcggctccttcaaccaaattccta
cgcgatctcgagtacctcagcgaaggccgcgtcccaattcaccatgcagacaacccgata
ctaagcgtagtcagcttcttggctggtctggcacctgcaaacgtcactgaagccgcagtc
gcttcagggcgcagtgtcaacgaaatgaagcgcatcttgcaggagaagatcaacaaggcc
ccaacagccccctcagaaaagggcaaggaaaaggaaggcgagcagtccacacccgcagcc
tcagcttcagatatgaagccagagggcggagacgccatggacattgacacatctgccgaa
tccactgcagtagccacaaaagaagtagactcttcttcaggcggcaacccgctcgccacc
ctcccctttgccctctccgccgcgcgctcctcagcgctcgcctcccacgaggagcgccac
atcacgcgcctcgtctctggcgccgtcaacctgcaactccaaaagctgcagctcaaactt
gcccacttcaacgacttcgagaagctcctctcggcggagcgccgcgacctccagcgccgc
cgccaacaactcttcatggaccgcctcaacttccaacgccgtgtccgcgccctcgaagac
gccaccaagaaaatcagctcctcaatgggcgaccagggcctgcccggtagcatgagcaat
gaggatgctgtgcaggcgcttacagaggctattcgcatgtttggcgttggcaagggtgag
gatagcatgggggtgaagcgggatagcgttgatgcgggggttgtgatgccggttgctgag
gcggccgaggggtacggtaagatagagatttaa
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integrated database retrieval system
