Bipolaris sorokiniana: COCSADRAFT_122791
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Entry
COCSADRAFT_122791 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_122791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_122791
Spliceosome [BR:
bsc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
COCSADRAFT_122791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
19130533
NCBI-ProteinID:
XP_007702691
JGI:
Cocsa1_122791
UniProt:
M2R227
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MATLEQELLADFADSGDEDIQDLENDFADGDNGDDDDMVDEEAEYRAKEKKDNKGPADIR
SAQQLKANLESVLARIEETKDQMDVVDGESFEDSPEYKLLTEANEFSTQIDGEIAAVHKF
IRDHYSAFFPHLEDLIKNPVVYARACLVIGGGPLKDIKTITPQLKAIEGLEPAQVMIVEI
EATRVEGRLLDEAELNLIRNACNLLLELNVAKSKILGFVESRTEVFCPNLTALIGSLTAA
HLISYSGGISNLAKTPACNIAPLGSTKVSGATVGLSNIGLRHEGYLYHSEIIQNQRPDLR
KQALRIVSAKVILAARVDAHSSSRNADIGMDLRRECERRLDKLTELPANQKGQRALPVPD
EKPSRKRGGRRARKAKEATAMTEIRKAQNRMTFGKEEKEVGYGDSVKGMGMIGATDTGRL
RAQQIDPKTRAKLSKKNPGWGGDTTLGMASSLKGFGTGGTATSLRAQGLRTGGVGLGGAG
TSSIAFTPVQGLELVDPKAREEMQRKRKADDDRWFKGGSFTQLNGSSKVDAGGFKVPALP
NKKPKAE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctactctggagcaagaacttctggccgacttcgccgacagcggagacgaagacatt
caggacttggagaatgattttgccgacggagacaacggggacgatgatgacatggtagat
gaggaggcggagtacagggccaaggagaaaaaggacaacaaggggcctgcagacatacga
tcggctcagcaactcaaagcaaatctggaatcggtgcttgcacgtatcgaggaaaccaaa
gatcagatggacgtggtggatggcgaatcttttgaagactccccggaatacaagctcctc
accgaagccaacgaattctctacccagattgatggcgaaattgctgccgtccacaagttt
atcagagatcactattcggccttcttcccgcatttggaagacttgatcaaaaatcccgtc
gtctacgcgagagcatgtttggtcattggtggcgggcctttgaaggacatcaagaccatt
acgccacaactcaaggcaatcgaggggctcgagcctgcccaagtcatgattgtcgagatc
gaagccacacgggtcgaaggaaggcttcttgacgaggctgagctaaacctgataagaaat
gcctgtaatctcttgctcgagttgaatgttgcaaagtccaagattttgggcttcgtcgag
tcgcgaactgaggtgttttgccccaacctgacagcgcttattggatccttgaccgccgca
catctcatttcgtactctggaggtatctccaatctagccaagacacccgcctgtaatatt
gcgcctttgggttcgaccaaagtatcaggcgccactgtcggtctttccaatattggtctg
agacacgaaggttacctctaccacagcgagatcatccagaatcagaggcctgatcttcga
aaacaggcgctgcgcatcgtgtcggccaaggtgatactggctgctcgcgtagacgcccac
tcaagctcgcgcaatgcagacattggcatggatctgaggagagaatgcgaacgccggctg
gacaagctgactgagcttcctgcaaaccaaaagggacagagagcgcttcccgtgcctgac
gaaaagccatcacgcaagcgtggtggaagacgagcgagaaaggccaaggaagcaactgcc
atgacagaaatccgcaaagcgcaaaacaggatgacgtttggcaaggaagagaaggaggtc
ggctatggagactcggtcaagggcatgggcatgattggagctaccgacacgggacgcctg
cgtgcgcagcaaatcgaccccaagacgcgcgccaaactcagcaagaagaaccctggttgg
ggcggagacacgacactcggcatggcatcgtcactcaagggctttgggaccggcggcaca
gcgacgagtctgcgggcccaagggctgcggaccggcggtgtgggcctgggtggcgcggga
acgagctcgattgcatttacccccgtgcaagggctggagcttgtggacccgaaggcacgc
gaggagatgcagcgcaagaggaaggcagacgacgatcggtggttcaagggtggttctttt
acgcagcttaatggaagctccaaggtggatgctggaggcttcaaggtgcctgcgctaccg
aataagaagccaaaagctgagtga
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