Bipolaris sorokiniana: COCSADRAFT_124441
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Entry
COCSADRAFT_124441 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
COCSADRAFT_124441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_124441
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_124441
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
COCSADRAFT_124441
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
COCSADRAFT_124441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
TFIIF_beta
DUF2730
BRE1
FapA
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
19130595
NCBI-ProteinID:
XP_007703389
JGI:
Cocsa1_124441
UniProt:
M2R1A5
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MSSPSVREASAVAPGITIDDAPAEDGNQIPDEGIASDADETERLKFLTTGTRAQDDLERD
IGRQADQMLIEQADARDKKRIEKLEAEAKRAEAAIQKLKNRLALPALDTQKAKLRGEMAA
YRQKIDDLDKEMDGIQQRINDRHKEPGVDEAAGDSANGPLPNETQREWLIRTGKITPFSK
LAQNQPGSGTLGEVMLDAEVEDIVVEAAKGPVSHRNLMKPGFEDVESSSEAPSPHPPARS
RKRRKATPASESGADLGFTDPDSDDAFEPGMTDRQLATLDESDEDVQDTAEDDSYAEEAT
GRKRKAKGKKPKKAKAASTEGAVVEDLAGVDDGNERVYRKRVETWSKNRAAARKKAKANN
GETTAEEEGEEECYQPHPTETDAEFDGGFRIPGDIYPALFDYQKTGVQWLWELYSQNVGG
IIGDEMGLGKTIQAVSFVAGLHYSRLLTKPVIVVCPATVMKQWVNEFHRWWPALRVSILH
TSGSGMLDTRREDRIEREMELRNYGDYDTTLTGAGKAAKKILEKVKRDGHVLVTTYSGLQ
TYAEFLIPTEWECAILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLF
DFVFPMRLGTLVNFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKAD
VATDLPQKKEQVLFCKLTKQQRQAYESFLASEDMRSIANGKRQMLYGVDYLRKICNHPDL
TEHKTLSKKPGYDYGNANKSGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFISQL
PDINWRRMDGETPIKDRQNMVDEFNTDPNLHVFLLTTKVGGLGVNLTGANRVIIYDPDWN
PSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFQ
MSDLHDLFTLGVESAEGETETGNLFRGSEVKFEEDGKTAEGEKDDATAAKDLAAVKGISR
SEAFKAPVSDSEETPTTNEDGTATDDKTPVDSRLMSTIFAKTGVHSVLEHDAIMNSTSGG
RKRKVQADPAYIQREAKRQAALAAEQLKKSMEEARNVPAGTPTWTGQFGQAGRPDAPRGG
GPSTRGGRGGRGGGRGGLPSSTSILNNLAARQGRLVPSSSTTSDAPTIAATTTTPQTFRG
RRMLEMIRDFMLTHGGTVPSRMLVDHFDHYCRAQPGRNEEFKEMLKLIATLEKSGSAQRG
RWVLKDEWRTPARGTSSVRRG
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccctctgtacgcgaagcgtcagctgtggcgcctggcatcacaatcgacgac
gctccagccgaagatggcaaccagatcccagacgaaggcatcgcctcggatgcagacgaa
acagagagactcaaattcctgacaaccggtactcgagcacaagacgacttggaacgagat
attggccggcaggccgaccagatgctcatagagcaggcagatgctcgggacaaaaagcgc
atagaaaagttggaggctgaggcaaagcgagcagaggccgctatacagaagctcaaaaac
cgtttggctttaccagctctcgatacacagaaggcaaagctacgtggggagatggcagca
tatcggcagaagatcgacgacctggataaagagatggatggcatacaacagcgcatcaac
gatcgccacaaagaacctggggtagatgaagcagcgggagatagcgcaaatgggccccta
cccaacgaaacacagcgtgaatggcttattcgtacaggaaaaattacacctttttccaag
ttggcgcagaaccaaccgggctcggggaccctaggagaggtcatgctggacgccgaggtt
gaagacatagtagtcgaggcagcaaaaggacctgtttcgcaccgtaatctaatgaagcct
ggctttgaggacgtcgagtccagttcagaagctcctagtccacatcctccagcacggtct
aggaagcgaaggaaggctactcctgctagcgagtctggtgcagacctcggttttacagac
ccggactctgatgatgccttcgagcctggtatgaccgatcgccagcttgcaacgttagat
gagtcggacgaagacgtgcaagacacggccgaagatgactcctatgcagaggaggctacc
ggtcgcaagcgcaaagccaagggcaaaaagccgaagaaagccaaagctgcatctacagaa
ggagcagtggttgaggatcttgcaggtgttgatgatggtaacgagcgagtctaccgaaaa
cgcgtagagacttggtcaaagaaccgagcagctgcaagaaagaaggcgaaagccaataat
ggcgagacaactgcggaggaagaaggagaagaagagtgttaccagcctcatcctaccgaa
accgatgcagagttcgatggtggatttcgaattcctggtgatatatatccagcattgttc
gactatcagaagacgggtgtgcagtggttatgggaactgtattctcaaaatgtgggcggt
atcattggagacgagatgggtcttggtaaaacaatacaggccgtcagcttcgttgcaggc
cttcattattcgaggctacttaccaagcctgttattgtagtatgtccagcaactgttatg
aagcagtgggttaatgagtttcaccgttggtggccagcactacgggtctctatcctacat
acatctggtagcggtatgctagacacccgacgcgaagaccgcatagaacgagagatggaa
cttcgaaactatggcgactacgatacgactctgactggcgccggtaaagctgctaagaag
atacttgaaaaggtcaagcgggatggacacgtactcgtcactacttactcggggctgcaa
acatacgctgagtttttgattccgactgaatgggaatgcgccatcttagacgagggacac
aagattcggaaccccaatactgccattactattcactgcaaggaacttcgtacaccaaac
cgcatcatcctttcgggaactccaatgcaaaacaatctaacggaactttggtcactgttc
gacttcgttttccctatgcggcttggtacccttgtcaactttcgcaaccagttcgaattt
ccaattaagcgtggaggatatgcaaatgcttcgaatctagaatttgagactgcagttcga
tgcgctgaaaccctgaaagatgctgttagcccatacttgctccagcgtttcaaggctgat
gttgcaaccgatctgccacagaagaaagaacaagtgctgttctgtaagttgacaaaacag
cagcgacaagcttacgaatcctttctagcatcagaggatatgaggtcaattgcaaacggc
aagcgccagatgctttacggcgtcgactatcttcgcaagatatgcaaccatcctgacctt
acggagcacaagactctgtccaagaagcctgggtacgactatggcaatgccaataagtcg
ggaaagatgcaggtcgtcaaggagttactatccctgtggaagaagggcggacacaagacg
ttactctttgcccagcaccgcatcatgcttgacatcctgcaaaaattcattagccagctt
cctgatatcaactggcgccgaatggatggcgagacacccatcaaggaccggcaaaacatg
gtggacgagtttaatacggatccgaaccttcatgttttcttactcaccacgaaagtcggt
ggccttggtgtcaatctcacaggtgccaatcgcgttatcatatacgacccagattggaac
ccttcgactgatattcaggctcgagagcgatcgtggcgtctaggacagaagcgagaagtc
gagatctaccgcctcatgtcggccggtactatcgaagagaagatttaccaccgtcaaatc
ttcaagcagttcttgaccaacaaagtgctgaaagacccaaaacagcgacagacgttccag
atgagcgacctgcacgatttgttcacacttggtgttgagagtgcagagggggagacggaa
accggcaacttgtttcgtggctccgaagtcaaattcgaagaggatggcaaaacagcagaa
ggtgaaaaagacgatgctacagcagccaaggatctagcagctgtaaaaggcatatcacga
tctgaagctttcaaagctcctgtttccgactctgaagagactcccactacgaacgaagat
gggactgctaccgacgacaaaacccctgtcgattcccgtctcatgtcgaccatattcgcc
aaaaccggcgtccactcagtgctcgagcacgacgccattatgaactcgacatccggcgga
cgcaaacgcaaagtgcaagccgatcccgcctacatccaacgcgaagcaaagcgacaagcc
gccctggcagccgagcagctgaagaaaagcatggaagaagcgagaaacgtgcccgcagga
accccaacctggaccggtcaatttggtcaagcaggacgccccgacgctcctcgcggagga
ggcccatctacgcgcggtggtcgcggtggtcgcggaggtggtcgcggcggcctcccctcc
tcaacctcgatcctcaacaacctcgccgcgcgtcaaggccggctagtgcccagcagcagc
acgacatcagacgcccccaccatcgctgccactaccacgacgccccagactttccggggc
cgccgcatgctcgaaatgatccgtgactttatgcttacccatggcggcacagtccctagc
cgcatgctcgtcgaccactttgaccactactgtcgtgcgcagcccggtaggaacgaagag
ttcaaggaaatgctcaagttgattgctacgctcgaaaagagcgggagtgcgcagaggggg
aggtgggtgctcaaggatgagtggaggactcctgcgagggggacttcgagtgttcgtcgt
gggtag
DBGET
integrated database retrieval system
