Bipolaris sorokiniana: COCSADRAFT_124842
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Entry
COCSADRAFT_124842 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_124842
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_124842
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
COCSADRAFT_124842
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
COCSADRAFT_124842
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
COCSADRAFT_124842
microRNA pathway
RISC loading complex
COCSADRAFT_124842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoL1
ArgoN
PAZ
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
19130606
NCBI-ProteinID:
XP_007703532
JGI:
Cocsa1_124842
UniProt:
M2SWM8
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MSYAPRGGGDRGRGGGGFRGDRGDRGGGRGGGRGGSDFRGRGRGDGRGDFGGRGRGDMRG
DFGGRGRGEGRGGFRGGRGGGTQENLAFQNPRPVDQRVLNTENALHPPAKKTLDLASLKL
SEDYPTRPGYGTQGVKVELTANYVELLTPSNMVLYRYAIDITPEVTGRKRHRVVQLLLEA
PEMTQYKGQIATDFRSTVVAKTKFTNDRDIVEIQYRSEGEDDPATGATVYKVFLQFTNTL
NIGDLVNLMNSTNLSQRLEHKDELTQALNIFLNHYAKSANNLATIGSSKSFSLHQNASRG
DLGAGLEVIRGFFSSVRVATCRILVNINVSHGAFYHTGPLPALMQGYGIRNTTALEKFLR
LVRVQTTHLKDKRNKAGEVIPRIKTIYGLARKDDGHGMEHRPRIKQHGAGAKDVEFWLDG
KNTPAAKGKGKGKGPVQGPTASGSGKYISVFDFFRTTYNYVLKYPDLPVVNCGNRENPTY
LPPEVCVVVSGQPSKAKLDALQTQVMIRHAVRKPWENAETIYKEGISTVGLDENTNVLLR
SFGLTITPGLIKVPGRVLKGPKVIYKHEEGGSGTKFAEPRDGSWNMIKIKFNVGAQLLKW
KAVMIGLPSRRDPFNQPEMSAIMQEFHQGLRRIGIDAQPPAPPERLQLQHPDDPALNTYL
KGAVGRVQLLFIILPESNIPLYKRIKTLADRDFGLHNVCAVGTKLAKEKGRPQYIANVAL
KFNLKLGGVNQKVENKNIGIIEQDKTMVVGIDVTHPAPGSASNAPSVSAMVASVDKTLGQ
WPATLRIQKGRQENVDELAGMLKSRLNLWKTKGRHQAFPENILVYRDGVSEGQYDMVLTE
ELAQMRKACEQVYPATDTKKGLPRFTVVVCGKRHKTRFYPTSVQQADRYGNTQPGTVVDR
GVTEARNWDFFLQAHAALQGTARPCHYYIVHDEIFRQIYAKQIPAPFQNIADVIEDLTHN
MCYLYGRATKAVSLCPPAYYADLACDRARCYLAHLYDTPAPSAAPSMAGTSVTGTSAPAA
EPGSVEIHPNIRDSMFYI
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgcaccccgaggcggaggcgatagaggccgcggcggcggcggctttcgtggc
gatcgtggcgaccgcggcggaggtcgcggcggtggaagaggaggaagtgactttagaggt
aggggccgaggagatggaagaggagattttggaggtcgtggccggggcgatatgagaggt
gattttgggggtcgtggtcgaggtgaaggacgaggtggctttcggggtgggagaggcggc
ggcacgcaggaaaacctggccttccagaaccctcgacccgtggaccaaagggtcttgaat
accgaaaacgccttgcatccccccgcgaagaagacccttgacctcgctagtctgaaactt
tccgaagactatccaacccgtccaggatatggcacccaaggtgtcaaggtcgagcttact
gccaactatgtcgagcttctcacaccatcaaacatggtattgtatcgttatgccattgac
attacccccgaggttacgggcaggaagcgccaccgcgttgtgcagctcttgctcgaagcc
ccagagatgacgcaatacaaaggccagattgctactgatttccgttcaaccgtagtggcc
aagaccaagttcaccaatgacagggacatcgttgaaatccagtatcgttccgagggcgaa
gacgatcccgcgacgggagccacggtgtacaaagtcttccttcaatttacaaacaccctg
aacatcggcgacctggtgaatttgatgaactctaccaatctttctcagcgtttggaacac
aaggacgaactgactcaggcactcaacatcttcttgaaccattatgccaagtcggctaac
aacctcgctaccatcggatcatccaagagcttttcccttcaccaaaacgcttccaggggc
gaccttggagccggtctggaagtcatccgtggattcttttcaagtgtacgggttgcaacc
tgtcgcatcttggtcaacatcaacgttagtcatggggctttctatcacaccggtcctttg
ccagcgcttatgcagggctacggtatacgaaacacgactgctctcgaaaagtttctcaga
ttggttcgtgtccagaccacacatttgaaggacaaacgcaacaaagctggtgaggtgatt
cctcggatcaagaccatttacggacttgctaggaaggacgatggacatggcatggaacat
cgaccgcggatcaaacaacacggtgccggtgccaaggacgtcgagttttggctggatggg
aaaaacacacctgctgctaagggcaaaggtaaaggtaaaggtccagtacagggtccaacg
gcctctggatccggaaagtacatcagcgtatttgatttctttcgcacaacgtacaactat
gttcttaaataccctgatcttcccgtcgtgaattgcggtaaccgagaaaaccctacatac
ctcccaccagaagtctgtgttgtcgtttccggccaaccgtccaaggcgaaactagatgcg
ttgcaaactcaggtcatgatacgacatgcggttaggaagccatgggagaacgctgagacc
atctacaaggaaggaatatccactgttggcctggatgaaaacaccaatgtgcttctgcgc
tctttcggccttaccatcacgccagggttgatcaaagttcccggacgtgtcctgaaagga
ccaaaggtgatctacaagcacgaagagggaggaagtggtaccaaatttgccgagccgcga
gatggtagctggaacatgatcaagatcaagttcaatgtcggtgctcagctactaaaatgg
aaggctgtgatgattggacttccttcccgacgggatcctttcaaccaacctgaaatgagt
gctatcatgcaagaatttcatcagggcctgcgcaggattggtatcgacgcgcaaccaccg
gcccctcctgaaagactgcagcttcagcatccggacgaccctgcgctcaacacttatctt
aagggggctgttgggagggtacagttgctgtttatcatactccccgagtctaacattcct
ttgtacaagcgcataaagacacttgccgacagggatttcggcctgcacaacgtttgtgct
gttggcaccaagctagccaaagagaaagggcggccccagtacatcgcaaacgttgccctc
aaattcaatctgaagcttggcggtgtcaaccagaaagtagagaacaagaatattggaatc
attgagcaggacaagaccatggtagttggcatcgacgtcactcatcccgccccgggttcg
gctagcaatgcgccttctgtctcagcaatggtcgcttcagttgacaaaaccctcggacaa
tggccagcaactctccgcatccaaaaaggaagacaggaaaatgtcgatgagcttgctggg
atgctcaagtcgcgcctcaatctctggaagacaaagggtcgccatcaagccttcccagaa
aacatactcgtatatcgtgatggagtttcagaaggccaatacgacatggtgctcactgaa
gagttggctcagatgcgaaaagcatgcgaacaggtgtatccggcgactgataccaagaag
ggtcttccgcgcttcactgtagtagtctgcggcaagcgtcataagacacggttctacccc
acgagtgtgcaacaagctgataggtatggcaacacacaacccggtactgtcgtagatcgc
ggcgtgacggaagctcgcaactgggacttttttcttcaagcacacgccgcactccaaggt
acggctcggccatgccactactacattgtgcacgatgagatcttccgccagatctatgcc
aagcagatccctgcgccatttcaaaacatcgccgacgttatcgaggaccttacacataac
atgtgctacctatacggccgggcgacaaaggccgtcagcttgtgtcctccagcatattac
gctgatcttgcatgcgaccgtgcacggtgctaccttgctcacctgtatgacactcccgcg
ccgagcgcagcaccttctatggccggcacatcggttactggcactagcgctccggcagca
gagcctgggtctgtggaaatccaccccaacattcgcgattcaatgttctacatctag
DBGET
integrated database retrieval system
