Bipolaris sorokiniana: COCSADRAFT_125527
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Entry
COCSADRAFT_125527 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_125527
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_125527
Spliceosome [BR:
bsc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
COCSADRAFT_125527
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
COCSADRAFT_125527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_PARP14_3
RRM_7
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
19130628
NCBI-ProteinID:
XP_007703871
JGI:
Cocsa1_125527
UniProt:
M2QZQ0
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MDINSLLSPSDSPAGTPTPQPAPAAASPSLLPSPSKRTRRQMPSRTPSGLSQQVMSSSSP
QPQPHQTLQSRGPSPGYTQIANGARSIHSAMGTPQQVSSPRDARMTPPNPMYRQASTPGM
DTLADLASMQQQQAARQNSTVHQRPVTLQHLGQNLSGESVVSIMSEPSPRPRNFVTRSLE
PQLIDWLNQLDKTLLENPFDYYSHVSLATTLHQGLQNHLASFDADPNAYELVQTLRDAYK
TMSDKYPLGELLWHYRLNDEKTLARDVEERMGVLELHKQATQEEPYSAKLWAAYGEYVSY
LVACSWDQVPPEEWPEEERLIGRELFQPQLLLDVLQQGAERVKYNLQESNLVWDRYLQVL
EEDLERGGFSQEKAKRVAAIYNERLGQPHATWANTLSRYSSFNSRYNQSHYEQVMDDAVQ
KNTHIKQQYANREEYEFKLLQAIQAGDQAAEYIAMTRYLKWEKRTMGVYSFHLVNALYER
ATLRFPVDPSIWEDYVEFLVWQDNRSVDLLNVLERATRHCPWSGALWSHRLLTLEAENKP
FEDLELVKHTATGSGLLEHTDLDELIKVQLAWCGYLRRRAFNDPRATEDDVDVAEVGIRS
ALEFVREVGMKKHGREWTDPKYRLERTHIKFWLQRGDIDQARQIQESVAKHQEDSYDFWY
RYYIFEMLLWAPHSTRNKENAGHQLLPPSLATAVLERGMKRLQTIDHPEPLLEMYVNHCE
QHETAIKVRSAAMERRRAERIISVRKEKERALAAQTAALQETPESHAADASSKRKREGGD
EEAVPKKSKHGETEEVTNALVNGQARVASEAPSEARSTGPKRDREHTSIIVKKLPPNISQ
TRIRQFFTDAGTVRNLVLKEEKDSLTAVVEFETPEEADYALSKEAKGFDGHEISIERGQS
TTLYVTNYPAHADEAWLRNLYNPFGEIVGIRFPSLKYDAHRRFCYVQFASAEEAISATQL
DGTDVEGLKLVSKISDPNAKKKRDGATSEGREVYVWHLNFKITEREIRDAFAKFGKIERT
KCPIIKKTGNNRGFCYIVYETKESADAAVAEMHEKEFHGLKLNVEIASDRPATKPKIQST
LENPEAPSVHETASGQGNGPADAALKPASFMDRSIAILNLPDTVPDVRIKPLVEEYGFKK
IKLEPHHGGAIIEFTTVEGAGKAQFALEGKDFEGRKLRIGTVQDLNKQKGEWKANNSFVQ
PNRVSRPTAPRGAGRGRGKPGLGRPMIPKSALPSNGEPKSNADFRAQFLKESTKGSTKDA
DRMEE
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaactcgttgttgtcgccgtcggactcgcctgcgggcactcccacaccacag
cccgcgcctgccgccgcgtcgccatcactgctaccatcgccgagcaagcgcacgaggcgc
cagatgccatcgcggactccctctggcctcagccagcaggtcatgtcatcgtcgtcgccc
cagccccagccgcaccaaaccctccagtcgcgaggcccatcgccgggctacacccagatc
gccaatggcgcaagatcgatacacagcgccatgggcacaccccagcaagtctcgtcgcct
cgtgacgcgcgcatgacacctccgaatcccatgtaccgacaggcgtcgacacccggtatg
gatacactagcagatctcgccagtatgcagcagcaacaagctgcgcgacagaactctaca
gttcatcagcgaccagtcacactccaacacctgggccaaaacctctctggcgagtcggta
gtcagtatcatgtccgaaccctcaccgcgaccgcgcaatttcgtcacgagatctctcgag
ccgcaactcatcgattggctcaaccaactcgacaagaccctacttgagaatcccttcgac
tactacagccatgtctcgctcgccaccacactgcaccaaggcctgcagaaccacctcgct
tctttcgacgccgaccccaacgcatacgaacttgtccagacactccgcgatgcttacaag
accatgtctgacaagtacccattgggcgagctgctatggcactaccgactcaatgacgag
aagacactggcaagagatgttgaagaacgcatgggcgtgctagagttgcacaagcaggca
acccaggaagagccttatagtgccaaactctgggcggcgtacggcgagtatgtgagctac
ttagtcgcttgctcatgggaccaggtaccgccagaggaatggccagaagaagaacgtctt
atcggtcgtgagctttttcagcctcagctcttgttggatgtgttgcagcagggcgctgag
agagtcaagtacaatcttcaagaaagtaaccttgtgtgggatcgctacttgcaggttttg
gaagaggatctcgaacgaggcggcttcagccaagaaaaggcgaagagagtagccgccatt
tacaacgagcgtctgggtcaacctcatgccacatgggcgaacacactatcgagatattcc
tccttcaactcgaggtacaaccagagccattacgagcaagtcatggatgatgcagtccag
aagaacacccatatcaaacaacagtacgccaatcgcgaagaatatgaattcaagcttttg
caagccatccaggcaggcgaccaagccgctgagtacatcgcgatgacgaggtatctgaag
tgggagaagcgcaccatgggcgtctacagcttccacctcgtcaatgcgctctatgagcga
gccacgctccgtttccctgttgatccatcaatatgggaggattatgtcgagttccttgtt
tggcaagacaaccgttctgtcgacctactgaatgtcttggaacgcgcgacgcgtcactgc
ccttggtctggagcactgtggtcacatcggttacttacacttgaagcagagaacaagcca
ttcgaagacctcgaactcgtcaagcacacagcaaccggatcgggccttttggagcatact
gatttggatgaacttatcaaggtgcagcttgcttggtgtggttacttgcgccggagagca
tttaacgacccccgagcaacggaggatgatgtcgacgttgcagaagtcggcatacggtct
gcactggaatttgttcgcgaagttggtatgaagaagcatggcagggagtggaccgacccg
aaataccgtctcgaacgaacccacataaaattctggcttcagcgtggtgatattgatcaa
gctcgacaaatccaagagtctgttgcaaaacaccaagaagactcgtacgatttctggtat
cgctactacatctttgagatgcttctctgggcaccacactcaacccggaacaaggagaat
gcaggacaccagctcctgccgccttctcttgcaactgcagtcctggaacgcggtatgaag
cgtctacagaccattgaccacccggaaccactccttgagatgtacgtcaatcattgcgag
caacacgagacagccatcaaggtccgaagcgctgcgatggagcgacggagagcagagcgc
atcatctcagttcgtaaggaaaaggaacgtgcactcgccgcccagacagcggcgttgcaa
gaaacgccagaaagccacgcagcggatgcttcaagcaagcgtaagagggaaggtggagac
gaggaagcagttccgaaaaagagcaaacatggggagacagaggaggttaccaatgctttg
gtcaacggccaggccagagtggctagcgaagccccctcagaggctcgttccaccggaccc
aaacgggatcgcgagcatacttcgattattgtcaagaagctacctcctaacatatcgcag
acccggattcgccaattctttacggacgctggtactgtgcggaatttggtgctgaaagaa
gagaaggatagcttgactgcagtcgtagagtttgagacgcccgaagaagccgattatgca
ttgagcaaagaagcaaagggctttgatggtcacgagatttcaatcgagcgaggccaaagc
acgacactctatgtcacaaactatcccgcacatgccgatgaagcatggttgagaaacctc
tacaacccatttggcgagattgtgggcattcgatttccctctctgaaatatgatgcgcat
cgccgattctgctatgtacaattcgcctctgccgaagaagcgatttcagcgacacagctg
gatggtactgacgtcgagggattgaagcttgtctcgaagatatcggatccaaacgccaaa
aagaaacgcgacggcgcgacatctgagggccgtgaggtatacgtctggcatctcaatttc
aagatcacggaacgtgagatccgagacgcttttgccaagtttggcaagattgaaagaacc
aaatgtcccattatcaagaagactgggaacaatcgcggcttctgttacattgtttatgag
acgaaagagagtgccgacgctgcggttgcagagatgcatgagaaagagttccatggtctc
aaactcaatgttgagattgccagtgaccgacctgctacgaagccaaagatacaatcaaca
ctcgagaacccagaagctccatctgtccatgaaacagcttccgggcagggcaatgggcct
gcagatgccgctcttaagccagcatcgttcatggaccggtccatcgccatcctcaaccta
ccagacactgtccccgacgtgcgcatcaagccactcgtcgaagagtacggcttcaagaag
atcaaactagagccccaccacggtggcgccatcatcgaattcacaaccgtggagggagca
ggcaaagcgcaattcgcgctagaaggcaaggacttcgaaggaagaaaactccgcatcggc
acagtccaagacctcaacaaacaaaagggagaatggaaagcaaacaacagctttgtccaa
cccaaccgcgtctctcgccccactgccccccgtggcgccggccgtggaagaggaaaacca
ggcctcggccgccccatgatacctaagagtgcgctcccaagcaacggagagccaaaaagt
aatgcggattttcgcgcgcagttccttaaagaatccacaaagggctcgactaaggatgct
gataggatggaggagtaa
DBGET
integrated database retrieval system
