Bipolaris sorokiniana: COCSADRAFT_132363
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Entry
COCSADRAFT_132363 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
COCSADRAFT_132363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsc02000
]
COCSADRAFT_132363
04147 Exosome [BR:
bsc04147
]
COCSADRAFT_132363
04090 CD molecules [BR:
bsc04090
]
COCSADRAFT_132363
Enzymes [BR:
bsc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
COCSADRAFT_132363
Transporters [BR:
bsc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
COCSADRAFT_132363
Exosome [BR:
bsc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSADRAFT_132363
CD molecules [BR:
bsc04090
]
Proteins
COCSADRAFT_132363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_29
RsgA_GTPase
AAA_33
AAA_25
AAA_5
Zeta_toxin
AAA_15
nSTAND1
G-alpha
Rad17
AAA_28
DUF3676
IpaB_EvcA
Motif
Other DBs
NCBI-GeneID:
19130845
NCBI-ProteinID:
XP_007695143
JGI:
Cocsa1_132363
UniProt:
M2T6D0
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MGFTSGGEKSTSSTVEMEKESIISNEPAPMGAWKAYWRVFKYAQTTDLIMIGIAGIAACA
SGVGIASQNIIFGKFVTEFTDFDTGNAAAESLRSSSAKLALYFFLLGVGRMVVAYIYNFL
LTFSAYRIVRNIRHEYLKAALRQEVAYFDLGTSGSIATQAYSNGRLVQAGIAEKLGLTIQ
GLAAFLSSFIIAFVTNWKLTLIICGIAPLTVGVMIGCAFIEAGYEAKILERYADANSFAE
GVIASIRTVHAFDMRAELVNRFDGFLVQAHRYGNKISPLFGILFSAEYTIIYLGNALAFW
RGIHMLASGEIANSGDVFTVLLSVVIAALSITQLAPHSIEFTRAASAAAQLYVVIDRKTA
IDPMDPSGEQPASITGDVELENVVFAYPTRRDVTVLKSFSLRAPAGKVTALVGHSGSGKS
TIVGLLQRWYNPASGTIKLDGRSIDSLNISWLRRNVRLVQQEPVLFRGSVFDNIANGLYG
TDLEKASKEEQMKHVVAAAKTAYAHDFIEQLPHGYDTEIGQRGGLLSGGQKQRIAIARSL
VSNPRVLLLDEATSALDPHAEGIVQQALDQASAGRTTIVIAHKLATVRNAHNIVVMSKGE
IVEQGTHNELLAMNGAYSRLVTIQQLTVEGEDSPEGTEVEVSDEKSLKDDPEEKEGALYR
STTNAASIRTQAGAGRYSDEGTNQLGLLATIWRLIYETPDLKWAYLAMFSGCFLSAGLFP
GQAILMAYMIDVFTLTGNEMTDKGDFFAAMFVALAGACLFSYYAMGWGTNTLAQALAHNL
RKQIFNDILRQDIEYFDRSENNIGALTSRIDAYPQAVFELMGFNIGFILIAALSIMICSI
LGIVYAWKLGLVIVLAGMPAVIGFGWFKMILDGRLDRLVAKRLSTSSAIASESTTAIRTV
SSLGIERAILDRYTSELDQAVKGSRQPLLFVMFWFALTQASEYWFMALGFWYGCRLVASR
EITIFDFFVSYMAVFFCAQSTSQIFQFSTSITKGKNGANAIFWLRQLQPVVQETPQNKDN
SPDPEGSLQLAETSFAYPLRPHAPVLKNINLEARRGQFIALVGASGCGKSTIVSMLERFY
DPSSGAVLLGSQDLTTINPRKYRAQVGLVQQEPTLFQGTIRENIALGISNPTANTILDTS
TVSDADIERALRAANAWDFVSSLPEGVNTAAGPNGTQLSGGQRQRIAIARALIRNPRILL
LDEATSALDTESEKIVQNALAEAANDGDRITVAVAHRLSTIKDADVICVFYGGRIVEQGT
HAELLTGSGTLYKKMCEAQSLA
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcacaagcggcggcgaaaagagtaccagctcgactgtggagatggaaaaagag
agcatcatctcaaacgaacccgcgcctatgggcgcgtggaaagcatactggagggtcttc
aagtatgcacaaactacagacttgattatgattggcattgctggcattgctgcatgtgcg
tctggggtcgggattgcctcccaaaacataatattcggaaaattcgtcactgagtttacg
gacttcgacacaggaaatgcggcggcagagagcttgcggtcgtcgagtgcgaagctcgcg
ctgtacttcttccttttgggcgttggcagaatggtagtggcatacatctacaacttccta
ctcacatttagcgcgtaccggatcgtacgaaacattcgacatgagtacctaaaggccgcc
ttacgacaagaggtcgcctattttgaccttgggaccagtggatcgattgcaactcaagca
tactccaatggtcgccttgtccaagctggtattgcggagaaattaggactcactatccaa
ggcctagcagctttcttgagctccttcatcatcgccttcgttaccaattggaagcttacg
ctcatcatttgcggcatcgcgcctttgacagttggtgtcatgattggctgcgctttcatc
gaagccggttacgaggccaaaattctggaaaggtacgctgatgccaattccttcgctgag
ggagtcatcgctagcatccgtactgttcatgcattcgacatgagggcggaattggtcaac
aggttcgacgggtttcttgtgcaagcgcaccgctatggcaataagatttcacctctcttc
ggtatcttgttctcggctgagtacaccatcatctacctgggcaacgcacttgccttctgg
agaggtatccacatgcttgccagtggggagatcgcgaacagcggagatgtctttacagtc
ttgttgtcggtcgttatcgccgcgctcagcatcactcaactggctcctcattctatcgaa
ttcactcgagctgcatctgcggccgcccagctctatgtggtcatcgaccgaaagacagcc
attgaccccatggatccgtcgggtgaacagccagcttcaatcaccggagacgtcgagctt
gagaatgttgtattcgcctacccaactcgacgcgatgtcactgtgctcaagagcttctcc
cttcgcgcaccagcaggcaaggttacagctcttgtgggccacagcggatccggaaagagc
actatagtcggtcttttgcagcgttggtataaccctgcatcaggaactatcaagcttgat
ggtcgatccatcgactcattgaatatttcctggctgcgaaggaacgtccgtctggtgcag
caggaacctgttctattccgtggatccgttttcgacaatattgccaatggactctacggt
accgatctggaaaaggcttcgaaagaagagcagatgaagcacgttgtagccgccgccaaa
accgcttacgctcacgacttcatcgagcaactcccccatggttacgacacagagatcggt
cagcgcggaggtctactttccggcggtcagaagcagcgtatcgccattgcacgaagtctc
gtatcgaaccccagggtcctcttgctggatgaagcaaccagcgcactcgacccccatgct
gagggaatcgtccaacaggctcttgaccaagcttccgccggtcgcaccaccatcgttatt
gcgcacaagctagccaccgtccgcaatgcgcacaacatcgtcgtcatgtccaaaggagag
attgtcgaacaaggaacgcacaacgagctcctcgctatgaacggagcgtattcgcgtctc
gttaccatccaacaacttactgttgaaggcgaagactctccagagggcacggaagtggaa
gtatccgacgaaaagtcgctaaaggacgatcctgaagagaaagaaggcgcgctttatcgc
tcgactaccaatgcagcaagtatccgcacacaagctggagctggtaggtatagcgacgaa
ggcacgaatcaacttggattgcttgctaccatctggcgccttatctacgagaccccggat
ctgaaatgggcgtacttggccatgttttccggttgtttcctgtctgcgggcttgtttcct
ggccaagccattctcatggcctacatgatcgacgttttcactctgactggaaatgaaatg
actgacaagggtgacttcttcgcagccatgtttgttgcccttgccggtgcttgtttgttc
tcctattatgcaatggggtggggaacaaatacacttgcacaggctttggcgcacaatctg
cgaaaacaaatcttcaacgacattctccgccaggatatcgagtactttgatcgctcggaa
aacaacatcggagcactcaccagccgtatcgatgcctacccccaggctgtattcgaattg
atgggcttcaacattggattcatcctcattgccgcactgagtattatgatctgctctatt
ctaggtatcgtgtacgcctggaagctcggcttggtcatcgtccttgcaggaatgcctgcc
gtcattggctttggatggttcaagatgattcttgatggcaggcttgaccgtcttgttgcc
aagcggttgtcgacgagctctgcaattgcctcggaatcaacaacagctatccgaacagtg
tcttctctaggaattgagagagcgatcctggatcgatacacgtctgaattggatcaagca
gtgaaaggatcacgacagccgcttctgtttgttatgttttggtttgctttgactcaagcc
tcggagtactggtttatggctctcggattttggtacggatgtcgactcgttgcctctcgg
gaaatcactatcttcgacttcttcgtttcctacatggccgtcttcttctgcgcacaatcg
acatctcaaatattccaattctcaaccagtatcaccaaaggcaaaaacggcgccaacgct
atcttctggcttaggcaactccaaccagtcgttcaagaaacaccccaaaacaaggacaac
agccccgacccagaaggctctctgcaactcgccgaaacaagctttgcctatcctctccgc
ccacacgcccccgtcctcaaaaacatcaacctcgaagcccgcagaggccaattcatcgcc
ctagtcggcgcctcgggctgcggaaaatccaccatagtctccatgctagaacgcttctac
gacccctcgagcggtgccgtcctcctcggctcccaagacctcaccaccatcaacccgcgc
aagtaccgcgcccaagtcggcctcgtccaacaagaacccaccttattccaaggcacaatc
cgcgaaaacatcgccctcggcatctccaaccccaccgccaacaccatcctcgacaccagc
accgtctcagacgcagacatcgagcgcgccctccgcgccgcaaacgcttgggactttgtc
tcttcgctgcctgaaggcgtgaatactgccgccgggcctaacggcactcagctctccggc
ggccagcgccaacgcatcgccattgcacgcgcactaatccgtaatccacgcattttgctg
cttgacgaggcgaccagcgcgctcgacaccgagagcgaaaagatcgtgcagaatgcgctg
gcggaggcggcgaatgacggtgaccgcattacggttgcagtggcgcatcgtctgtcgaca
atcaaagatgcagatgtcatttgtgtgttttatgggggtagaatcgtggagcagggcacg
catgcggagttgctgacgggtagtggcacgttgtataagaagatgtgcgaagcgcagagt
ttggcgtag
DBGET
integrated database retrieval system
