Bipolaris sorokiniana: COCSADRAFT_134553
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Entry
COCSADRAFT_134553 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K08518
syntaxin-binding protein 5
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bsc04131
]
COCSADRAFT_134553
Membrane trafficking [BR:
bsc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
COCSADRAFT_134553
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
COCSADRAFT_134553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lgl_C
WD40_Prp19
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40
ANAPC4_WD40
WD40_CDC20-Fz
EIF3I
WD40_WDHD1_1st
Beta-prop_RIG_2nd
CFAP43_N
Beta-prop_HPS5
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
19130936
NCBI-ProteinID:
XP_007696170
JGI:
Cocsa1_134553
UniProt:
M2T2C3
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MAHLLRGKQAGISNDLSQGLSPDLFVLDHIRNYGINSKITQLAYDPVQSLIAVGTSESKY
GPGQIYVFGQKRVEVVLSLPNRSASVKILQFCAEKLLCVDSKNDLSVFSLDTKKLLNAHS
PPAKITALHSDPAIDYALLGTQHGEVFAYDLDRETLTPFKIPNLWREKFPRSRLTSVITL
SLHPRDIGSLLIGYNSGAVIYSFKQNKATHFFNYRVPKGAPGGDSDPGSVFKEREPPLTQ
AVWHPTGTFVLTGHEDSSIVIWDTKDGRIIQARTLTDTNVDKPGPGSFSPGAVEGSFALK
SPIFKIAWCANQDPDDTAILVAGGQPSNISAKSLTLFELGRTPVYATASWQILSAHFENP
KRQRILPCPPGTEVIDLFLIPRSSPHYAGCHDPIAIIALLASGELITLSFPSGMPITPTN
QLHISMTLVHPYINYINLSPVERTRWLGMTEKREKGPPFLTGGAEAVHPLKRFENRNIVQ
TAHADGTVRLWDAGHADEIENSALLQVDVARAVGRPEDVYITKTSFAGAASELSVGLKSG
EVVVFRWNTNKHAGQEYPPGENKPQALTDITERSEGSVKEGLLPLTLLDGGNGAITALKH
SDVGFVAAGFEGGSFAIIDLRGPAIIFQASVQEFIKSDKRSSFRRSSAHAAPKAEWPTCI
EFSVMTLEDEDYSSILVHVGTNLGHLATFKILPEANGRYSAKFAGACSLDERVLSICPIH
ADTGRPAYASQSTVGGLRTGLKVNGVLLAVTCSEARLFRPATSKGAHKTFDQFLCDAAMV
VRYEENGYALLGLYGDGCARAYSIPALKEIASVNVSEFLDVRRFSEAIITATGDILGWKG
PAELGLINIFGAGFRYDRAKDVLLNPDLLVPPRPTISNIQWISGTQYVTPADMDLLIGGP
DRPLSNRQLAQQRAEAEQERRRDNASSSMSPAAQYQPYPGQADAQAEEGWGAWASRQLNE
RTEKLNIVGDSMDNLSQNSAGWANDVNKFVGKQKRGFVMGAMKSKFGL
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcccatctcttgcgcggaaagcaagctggaatcagcaacgatctctctcagggcctc
agccctgatctttttgtgcttgaccatatccgcaactatggcataaactccaaaatcacc
cagctcgcatacgaccctgtccagtctctcatcgccgtcggaacaagcgagagcaaatat
ggccccggtcaaatttatgtattcggccagaagcgagtcgaggttgtgctgtcgctgcct
aaccgtagcgcatccgtcaagatcctccagttctgtgccgagaagcttttgtgcgtagac
tcaaaaaacgacctctccgtcttctctctcgacaccaagaaactgctaaatgcacactcg
cctcctgcgaaaatcacagcactccacagtgatcctgccatcgactatgcgctgttgggc
acgcagcatggtgaggtattcgcatatgatctcgatagagagacgctcacgcccttcaaa
atacccaatttgtggcgggaaaagtttccaagatcccgattaacgtccgtcatcacgctg
tcgctacaccctcgagacatcggctctctactgattgggtacaattctggcgcagtcatc
tactcgttcaagcaaaacaaggccactcactttttcaactaccgtgttcccaaaggagca
ccaggcggagactcagatccaggctccgtcttcaaggaacgcgaacctccactgacgcag
gccgtttggcatccaacggggacctttgttctgactggacatgaagacagcagtatcgtc
atttgggataccaaggatggccgcattatacaggcaaggacactcacagatacaaacgtg
gacaagccaggcccagggagtttcagcccgggtgcagtggaggggtctttcgcactcaag
tcgccaattttcaagatcgcatggtgcgcgaatcaggaccctgatgacactgccatcctt
gtcgcaggtggacagccatcgaacatctcggcaaagagtctgactctattcgagttgggt
cgaacgcctgtatatgctactgcatcatggcagatcctgtcggctcattttgagaacccc
aagaggcaaaggatattgccatgcccgcccggcaccgaagtcatcgaccttttcctcatc
ccgagatcttcgccgcactatgctggctgccacgaccctattgcaataattgctttactt
gcttccggcgagttgatcactctgtcttttccaagcggtatgcccatcacgcctaccaac
caactacacatctccatgacgcttgtccacccatatatcaattacatcaatctctcgcca
gtagagcgaacccgatggctcggaatgaccgaaaagcgagaaaaaggccctccattttta
actggtggcgctgaagcagtacatccactcaagagattcgagaaccgaaatattgtccag
acagcccatgcagatggtaccgtacgactgtgggatgccgggcatgctgacgagattgag
aatagtgcgttacttcaggttgatgttgctcgagcggttggacgaccagaggatgtctac
atcacaaaaacttcattcgcaggtgctgcctccgagctttcggttgggctgaagagtggt
gaagtggtagtgttcagatggaacacgaacaagcatgcaggtcaggagtatccacccggc
gagaacaaacctcaggcgctcacagacattaccgaaagaagtgaggggtctgttaaggag
gggctgttgcctcttacactgctcgatggaggcaatggagcgatcactgccttgaagcac
tcagatgtaggctttgttgctgccggttttgaagggggaagctttgctattatcgatctc
cgagggccagcaatcatcttccaagcgtctgtacaagagttcatcaagtcagacaaacgt
tctagtttccggcgcagctcagctcatgcagcaccgaaagcggagtggccaacttgtatt
gaattcagcgttatgacactcgaggacgaagactactcaagtatcctggtgcatgttgga
accaaccttggccatctcgcaaccttcaagatactaccagaagcaaatggtcgatactca
gcaaaattcgcaggcgcgtgctcgctagacgagagagttctgagtatctgccccatacat
gccgacacaggccgcccagcgtatgcctcgcaatctactgtcggtggtctgaggactggg
ctgaaggtcaacggcgtacttttggccgtcacctgctctgaggcgagactgttccgccct
gctacgagcaagggcgcacacaaaacctttgatcagtttctgtgcgatgccgcgatggtg
gtaaggtacgaggaaaatgggtatgcgctgcttggtctctacggagatggctgtgcaaga
gcctactcgataccagccctgaaggaaattgcatccgtcaatgtcagtgaattcctggat
gttcgacggttttcagaggcgatcatcacagccacgggagatatccttggatggaaaggt
ccagcagagttgggcctgatcaatatattcggagctggattccgatatgatcgagcaaag
gatgtcttgctcaatccagatctactcgtcccaccacgaccaacgatcagcaacatacaa
tggatatccggtacccaatacgtaacaccagctgacatggacctactcattggtggcccc
gaccgtccactctcaaaccgacaacttgcccaacaacgtgcagaagccgagcaggaacgt
cgtcgcgacaacgcctcatcttctatgtcacctgctgcgcaataccaaccctatcctgga
caggccgacgctcaagctgaagaaggctggggcgcatgggcctcgcgccagctgaatgag
cgcactgagaagctgaatatcgtcggtgatagcatggataatctgtcacagaacagtgcg
ggctgggctaatgatgtgaacaaatttgtgggaaaacagaagagagggtttgtcatgggg
gctatgaagagtaagtttgggttgtag
DBGET
integrated database retrieval system
