Bipolaris sorokiniana: COCSADRAFT_134979
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Entry
COCSADRAFT_134979 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_134979
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
COCSADRAFT_134979
TFIIIC, fungi type
COCSADRAFT_134979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_8
TPR_2
TPR_11
ARM_TT21_2nd
Alkyl_sulf_dimr
HTH_16
TPR_17
ChAPs
Motif
Other DBs
NCBI-GeneID:
19130948
NCBI-ProteinID:
XP_007696317
JGI:
Cocsa1_134979
UniProt:
M2TJB6
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MAPKCYQPAWFELAGNNETLILTSNVIRETGTLLWRQWNPEHHEDDRGFPPVPGTFEDDT
SNLMQPAAQHGRQHGPAVFEGFIPANPEQEDEDEYTKASEFHSSIYDRDFESSEEEEEED
DEDDEYGRMLEEEEERERLLQTQKDDSEVDADYSSEDAQQDEGDSDEMELGVEFEDMEGR
VRSTRGRKRGKPGREKGPRGPRAVADPGAEWKALQQQANAKFIEKDYEAALSFAQQAIQL
NPEIFDAYNIASEIYTEMGREEDSIAVLLAGAPTKRDPGLWQFIIERIQQLDPEQHPRFT
DENKSAAILPCLNEIILLNNDYEARSHKLEIEAQLGRSSKCVMLGLKMLKTRKEQGEDPD
TSVLKIMAMMGTASPRQTKIHLRKLIDSFEEAIDVFTQPGRDPVTNDLDWELINIYLDLL
DRAGSYATGVTKLKSLSRWKQGRHAETFWDEIDDDREFDIEDEPRRVAVPQFVRKSQDAK
YGSTLPLEIRVKLGLFRLRRSKDDFKEAMYHLEMLEPDDQGPDALMWDYEDLFRIIGDAL
HATGHDKDALRFYEPLFSNDSREFNLMSYIGLHTCFKNEGRTEKAAEVIPILKKWPAKSY
DDLAILAKFFEDQGMWQEAGQRAETIYRDKYGHKLKALGFQAYDELRVYYYNQRRQARGR
YAVRKSTVRRNRKKMQKATGQNGEEYDSANETGNKELPGIIAPTERPKKGLFRTKRTKAP
KIQAFLDVREEDAEPTPDVEPRPATIEGTDVPYRAITNRLFRGKLQKLATDFADDLKAAR
AQHREIVSSFKRLDEIWEPAEVGDEEATKEVLSITRELIEEFSTFDLFYSNKKEDLMTYF
RRVTAGDLWKESALMVLAVVANNVEDGETNPELQERPSTPPTDFWGVHFDKWCDAFGRYA
ILLAGEGDEEQCFATLDIALQANIFHRSQIYHRQLQICRLTCALAADNSPQASIAARWLL
KEYPFGTDLFRLYSAVNRLCSFPEGFATGPAYKVLMRYIKTVDYALLTPEQRIEFNFSTK
ATKGGFRNNVNIEDVDKVRGHDPALFALYAHVLMCGGSYMAALNYYFRAFALTPEDPVIN
LGIGVAYIQHAMKRLSENRQYQIQQGLSFIYRYYDLRIKSLHAIHRQEAEFNVGRMWHSL
GLVALALPVYERCVALSEQVRKEAQDQCIDGNWGCEDFSTDAAFAMQSIYAISGNFEGAL
EVTMKSLVIE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaatgctaccaaccagcatggttcgaattagcgggaaataatgaaacccta
atactgaccagcaatgtgattagagaaactggtacgctgctctggaggcaatggaaccct
gagcatcatgaggacgatagaggcttcccacctgttccgggtactttcgaagatgatacc
tccaacttgatgcagccagctgcgcaacatggcagacagcatgggccggcggtcttcgaa
gggttcatcccagcgaaccctgaacaagaggatgaagatgagtataccaaagctagtgaa
tttcactcttcgatttatgatcgcgattttgagagctcagaagaagaggaagaggaagac
gacgaagacgacgagtatggacgtatgcttgaagaagaggaggagcgagaacggctacta
caaactcagaaagacgactctgaagtcgacgcggattattcgtccgaagatgcacagcaa
gatgagggcgattctgatgagatggagctgggtgttgaattcgaggacatggaagggcgt
gtcaggtctacacgggggaggaagcgagggaaacctggacgagagaaaggtccccgaggt
ccccgcgctgtagccgacccaggtgcggaatggaaagccttgcagcaacaggctaacgcc
aaattcatcgagaaggactatgaggcagccctttcgtttgctcagcaggctatccaactc
aacccggagattttcgatgcctacaacatcgcctctgaaatttacactgaaatgggtcgc
gaagaagattccatagctgtactattagctggagcgccaacaaagcgtgaccctggtctt
tggcagttcatcatcgagcgtatccaacagttagacccggagcaacacccacgttttact
gatgagaacaagtcggctgctatacttccatgcttgaatgagatcatcctgctcaacaac
gactatgaggctcgcagccacaaacttgaaattgaggcacaactagggcgttcttcaaag
tgcgtgatgctgggcctcaagatgctcaagacacgtaaagagcagggagaagatccggac
accagtgtgctgaagatcatggcaatgatgggcactgcatcaccaaggcagaccaagata
catctccgcaaacttatcgatagctttgaggaggctattgatgtgttcacgcaacctggc
agggacccagtcacgaatgacctcgactgggagttgatcaacatctatcttgatctgcta
gacagagcaggcagttacgctacgggagttacaaagttgaaatcgctttcgcgatggaag
caaggcagacatgcagagacattttgggatgaaattgacgacgaccgcgagtttgatatt
gaagatgagccaaggcgtgtcgctgttccacagtttgtgcggaagtcccaagatgccaag
tatggctcaactcttccactagagatcagggtcaaacttgggttgtttcggctgcgcaga
agtaaagatgacttcaaggaagccatgtaccatctggaaatgttggagccagacgatcaa
ggtccagatgctcttatgtgggactatgaagatctcttccgaattatcggcgatgcctta
cacgctactggccacgacaaggatgcgctgcgtttctatgaaccattgttcagcaatgac
tcaagagagttcaatctcatgagctacattggcttgcacacttgcttcaagaatgaaggg
cggactgaaaaggcggcagaagttattcctattctaaagaaatggccagcgaaaagttac
gatgacctcgctattcttgcaaagttctttgaagaccagggcatgtggcaagaagctgga
cagcgtgcagagaccatttaccgcgataagtatggtcacaaactcaaggctctgggcttt
caagcctatgatgagctcagagtatactattacaaccaacgcagacaggctcggggtagg
tatgctgttcgaaaaagtactgtacggaggaacagaaagaagatgcaaaaggcgactgga
cagaatggcgaagagtatgattcggcgaatgaaacgggaaacaaggagctcccaggaatt
atcgcccctactgaacgaccgaagaaaggtctattccgaacaaagaggaccaaggcgcca
aagatccaggcattccttgatgtgcgcgaagaagacgccgaaccaacgcccgacgtcgaa
cccagaccggctacgattgagggtactgatgtgccatatcgggcaattacaaatagactg
ttccgcggcaaacttcaaaagcttgccacagattttgccgacgatctgaaggctgcgaga
gctcagcatcgagaaattgtctccagtttcaaacgattggatgagatatgggagccagca
gaagttggagacgaagaagctaccaaagaagtcttgtccattacccgagagctgattgaa
gaattttcgacatttgacttattttattcgaacaaaaaagaagacctcatgacctacttc
cgacgcgtaacagcgggagatctttggaaagaatctgcactgatggtacttgctgtggta
gcaaacaatgtcgaggacggcgagacaaatcctgaactccaagaacgaccgagtacacct
ccgactgatttctggggcgtccatttcgataaatggtgtgatgcatttggccgttatgcc
attctgcttgctggcgagggtgatgaagagcaatgttttgctacactcgatatcgccctc
caggccaatatctttcatcgctcccaaatctaccatcgacaacttcaaatatgccgactc
acctgtgcacttgcagccgacaactcaccgcaagcctctattgcagcgcgttggcttctt
aaagaatacccgtttggtaccgacctcttccgtctatacagcgccgtcaatcgtctatgc
tcttttcccgaaggctttgccactggtcccgcatataaagtactcatgcgctacataaag
acggttgactacgcgctccttaccccggaacagcgtatcgagtttaacttcagcaccaaa
gccaccaaaggcggtttcagaaataatgtcaacatcgaggacgtggacaaagtcaggggt
catgaccccgcgctctttgcattatacgcacacgttctaatgtgcggtggaagctacatg
gcagcgctaaactactacttccgtgcgttcgctcttacgcctgaagatccagtaataaat
ctgggcataggcgtagcatacatccaacacgctatgaaacgcctctcagagaacaggcag
taccaaatccagcaaggtctgtcctttatctacagatattacgatctccgcattaaaagc
ctacacgccattcatcgccaggaagcagagttcaacgtcggccgcatgtggcacagtttg
ggtcttgttgcgctggcgctccctgtgtatgagagatgtgttgcgctcagcgagcaggtg
aggaaggaagcacaggaccaatgtatagatgggaattgggggtgtgaggatttcagcacc
gacgccgcgtttgcgatgcagagtatctatgccatcagtggaaatttcgagggcgcgttg
gaggttacgatgaagtcgttagtcattgagtag
DBGET
integrated database retrieval system
