Bipolaris sorokiniana: COCSADRAFT_137915
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Entry
COCSADRAFT_137915 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_137915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_137915
Spliceosome [BR:
bsc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
COCSADRAFT_137915
Complex C
U5 SnRNP specific factors
COCSADRAFT_137915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Suf
TPR_16
HAT_Syf1_CNRKL1_C
TPR_CcmH_CycH
ChAPs
Motif
Other DBs
NCBI-GeneID:
19131069
NCBI-ProteinID:
XP_007697871
JGI:
Cocsa1_137915
UniProt:
M2RHX7
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MSRRDFLSMPAPENYVAGLGRGATGFTTRSDLGPAREGPSEEQMKEMLAKRAASLGQAAP
SAYGVTEKKEEERDEDEDRFQDPDNEVGLFSSGMNYDKEDDEADRIYQEVDEKMDKRRRA
RREAREQKEREEYERNNPKIQLQFADLKRALGGVSEEEWAALPEVGDMTGKAKRAREARM
ANSRSYAVPDSVLAAASKSGELDTSISTGDADGMTTNLASIGAAQLSALTVRLDSAASTP
GAQTSTTSGTATSVDPKGYMTALSKKESMGEEVPVEDINRARVLLESAVKTNIHNGPGYV
ALARLEEVAGKIHTAKKVIARGCELCPRSVVVWEEAIRLNRDNLHNAKVIAANGIKQNTK
AVKLWQAAIDLEQTPAARKKVTRQALDHNPQSVELWKTLINDTEELDAVRLLFAKATETV
PLSEELWISYARVSEPEAAQQILNKARKAIPTSWAIWIHACRLQEELGKVEMLDTIMTRA
VKSLIKENAMIKREEWITQAEICEEQGDKGTATAIIKATVGWGLDEDDERRDIWLEDARS
VLNRNKPETARAILGFAVAVFPYSTTIWHAFADLEKHHGTMDTLLSVLERAVNACPTSES
LWLLYAREMWQSGDPEGARKVLGRSFEALPGNEMLYTRAVDFEVDAGNYEQARSFLQVAR
ESAATDRIYMKSAVLERQLGNFEMAIDICNQGLQNWPGSWKLHAIKGQVYEQLSKLPEAH
EAFNIGTRAAPKAPVLFILLSRLQVKQGAIVKARSTLDRGRQQNPKSEHILLEQVRLERR
QNNISAAQQLMASALQQCPKSGLLWAEKIMHLESRTQRKPRALEAIKKVEKDALLFCVVG
RIFWAERRLDKAATWLVKAVTHDSDFGDAWVWYYKFLLQHGTEEKLQDTLAKAALAEPRH
GEIWQSVAKDPKNARKSVEEILKIAAEVAE
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacgcgacttcttgtcgatgccggcgcccgagaattatgtggctggattgggt
agaggagctacgggtttcacaacccgaagcgatctcggtccagctcgtgagggtccgtcc
gaggagcagatgaaggagatgctagcaaagcgcgccgcatcgctaggccaagccgcccca
tctgcgtacggtgttaccgaaaagaaggaggaagagagggatgaagatgaagaccggttc
caggaccctgataatgaagtcggcctcttctcgagtggtatgaactacgacaaagaagat
gacgaggcagatcgcatatatcaagaagtcgatgagaagatggacaaacgtcgcagagcc
agacgggaagcccgagaacagaaagaacgcgaagaatatgaacgaaacaaccccaagatc
caactccaattcgccgatctaaaacgtgcccttggtggcgtatccgaagaagaatgggca
gccttgcctgaggtcggagatatgacgggtaaagccaagcgtgcgcgtgaagcccgcatg
gccaattccagatcctatgcagtcccagacagcgtgctggctgccgcatccaagagtggc
gaactcgatacatcgatatccacgggagacgccgatggcatgacgaccaatctcgcaagt
attggtgcagcccaactttccgccctaacagtacgactcgattcagcagctagcacaccc
ggtgcccagacctcgacaacttctggtacggcaacatcagtagaccccaagggatacatg
actgccctaagcaagaaggagtccatgggtgaagaagtaccggtagaggatattaatcgg
gctcgtgtgcttttagagtctgctgtcaagacaaacatacacaatggacctggatatgtt
gcgctagcaagattggaagaggtggcgggaaagattcacactgcaaagaaggttattgcg
cgaggttgtgagctttgccctcgatctgtcgtagtctgggaggaagcgattcggttgaac
cgtgacaatctacacaacgcaaaggtcattgcggcaaatggtatcaagcaaaacacgaag
gctgttaagctgtggcaagcagcgatcgacttagagcagacacctgcggcgcgaaagaag
gttactcgacaggctttggatcacaaccctcagagtgtagaattgtggaaaacgctgatc
aacgatactgaggagctggatgctgtacgacttttgttcgccaaagcaaccgagactgtt
ccgctatctgaggaattgtggatctcgtatgcgcgtgtgtcagaacccgaggccgcacaa
cagattctcaacaaagcccgcaaagccattcccaccagttgggccatttggatacacgcc
tgtcgacttcaagaagagttaggaaaggtagaaatgctagacacgatcatgactcgagct
gtgaagtcacttatcaaggaaaatgccatgatcaagcgagaggagtggattacgcaagcg
gaaatctgtgaagagcaaggcgacaagggaacggcaactgctattatcaaggcaactgtt
ggatggggccttgacgaagacgacgaacgccgagatatctggctggaggatgcaagaagc
gtcttgaaccggaacaagccagagacggccagggctattttaggatttgccgttgccgtc
ttcccctacagtacgaccatttggcatgcatttgctgacctcgagaagcatcacggtacc
atggacacactccttagcgtacttgaacgggcagtcaatgcctgcccgacatcagaatcg
ctttggctgctttatgctcgagagatgtggcagtcaggcgaccctgaaggagctcgcaag
gtgctgggccgaagtttcgaggcgctccccggtaacgagatgctctacacgcgtgcggtc
gactttgaggtggatgccggcaactacgaacaggcgcgtagcttcctgcaagtagcacgt
gaatctgcagctacagaccgaatttacatgaagtctgcggtcctcgaacgacaactagga
aacttcgagatggccattgatatctgcaaccagggattgcaaaactggccaggcagctgg
aagctccacgcaatcaagggccaagtctacgaacagctctccaaactccccgaagcgcac
gaagccttcaacatcggcacccgagcagcccccaaagcccccgtcctcttcatcctcctt
tcccgtctccaagtcaaacaaggcgccatcgtcaaagcccgctcaaccctcgaccgcggc
cgccagcaaaaccccaaatctgagcacatcctcctcgaacaagtgcgcctcgagcgccgc
caaaacaacatcagcgcagcccagcaacttatggccagcgccctccaacaatgccccaaa
tcagggctcctctgggccgaaaaaatcatgcacctcgaatcccgtacccagcgcaaaccc
cgcgccctcgaagccatcaagaaagtcgagaaagacgccttgctcttctgcgtcgtcggc
cgcatcttttgggctgagcgtcgcctcgataaagcggcaacgtggctcgtcaaggcagtc
acacatgatagcgatttcggcgatgcgtgggtgtggtattacaagtttttgctgcaacat
ggtaccgaagagaagttgcaggatacgctcgcgaaagcggcgttggcggaaccgagacat
ggagagatttggcagagtgtggcgaaggatccgaagaatgcgcggaagagcgttgaggag
attttgaagattgcggcggaggtggcagagtag
DBGET
integrated database retrieval system
