Bipolaris sorokiniana: COCSADRAFT_138126
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Entry
COCSADRAFT_138126 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03030
DNA replication
bsc03420
Nucleotide excision repair
bsc03430
Mismatch repair
bsc03440
Homologous recombination
bsc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCSADRAFT_138126
03420 Nucleotide excision repair
COCSADRAFT_138126
03430 Mismatch repair
COCSADRAFT_138126
03440 Homologous recombination
COCSADRAFT_138126
03460 Fanconi anemia pathway
COCSADRAFT_138126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bsc03000
]
COCSADRAFT_138126
03032 DNA replication proteins [BR:
bsc03032
]
COCSADRAFT_138126
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_138126
Transcription factors [BR:
bsc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
COCSADRAFT_138126
DNA replication proteins [BR:
bsc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
COCSADRAFT_138126
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
COCSADRAFT_138126
MMR (mismatch excision repair)
COCSADRAFT_138126
DSBR (double strand breaks repair)
HR (homologous recombination)
COCSADRAFT_138126
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF4503
Motif
Other DBs
NCBI-GeneID:
19131079
NCBI-ProteinID:
XP_007697970
JGI:
Cocsa1_138126
UniProt:
M2TBA7
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MAEGAITQGAIQSIFQPSGCFVEHPVLQCVQIKTMEPKAGEANPVQRFRVVLSDIRNFIQ
TMIATTANEIVTSGQLKKGSIVRLLKYNPQRVKDKNILIIMELEVLSQYGELDKIGQPEA
LDTKPADAQPAAIPGNNFYGSKPAPAPQPQRSLPTHQSNPGTSSHPHLYPIESLSPYAHK
WTIRARCTHKSDMKEWHNQKGTGKLFSVNLLDDTGEIRATAFTEVADKLFPVFEEGVVYY
ISAPCRVTLAKKNFSNLPNDYELQFERDTEVEKAEDQDNKPQIRFNFTKIGDLTSVEKDT
TIDTIGVLKEVAEVTTITSKNTNKDFSKRELTLADDSQTSVRLTIWGKTAESFDVPLESI
VAFKGVKVSDFGGRSLSLLSSGSMMVDPDIDEAHKLRGWFNAVGQSATFSTHQNMVSTTG
GSKNDAKPISAIIEEEAYLQDTPSYMSLRASVLYVKDSTFAYPACSTQGCNKKVIEENPG
SWWCEKCQATFPEPNYRYVLSANVGDHTGTLWLSCFDEAGQTIVGMSANEAMKMKMDDEE
NGTRNFVNVMQEATCKTFNFRVRAKMETYQDQPKPRYQVMNIYPLNFAQEANKLAQLIKQ
YHMNEDSLFVN
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggagcaatcacccaaggcgctattcagagcatctttcagccgagcggttgc
ttcgtagaacacccagtcctgcaatgcgtgcagatcaagaccatggagcccaaggcgggc
gaggcaaatcccgtacagcgctttcgggttgtgttgagtgacattcggaacttcattcag
accatgatcgctaccactgccaacgagatcgtcacttctggtcagctcaagaagggatca
atcgtacgacttctcaagtacaatcctcaacgtgtcaaggacaagaacattttgatcatc
atggaactagaagttctttcgcagtacggtgaacttgacaagatcgggcagcctgaggct
ctagataccaagcctgccgatgcacagcctgctgctatccccggcaataatttctacgga
tcgaagcctgcgcctgccccacagccccaacgctcgctgcctactcatcagagcaatcct
ggaacttcttcacatcctcatctctatcctatcgaatcgctttcgccatatgcccacaag
tggaccattcgagcacgatgcacccacaagagcgacatgaaggaatggcacaaccagaag
ggaacgggcaaacttttcagtgtaaatctgctggatgatactggcgaaattcgagcgaca
gctttcacagaagtcgctgacaaattgtttccagtctttgaagagggtgttgtgtactac
atctctgcaccctgcagagtaacgcttgcgaagaaaaacttctcaaacttgcccaacgac
tatgagctgcaatttgagcgtgacactgaggttgaaaaggcagaggatcaggacaacaag
ccacagattcgattcaacttcaccaagattggcgatctaacctcggttgaaaaggacaca
accatcgacacgattggtgtattgaaggaagttgctgaggttactacaataacttcgaag
aataccaacaaagacttcagcaagcgagaattaacactagccgatgacagtcagacatca
gtgcgacttaccatctggggcaagactgccgagagcttcgatgtaccactggagtcgatt
gttgctttcaagggagtaaaggtctccgactttggcggccgaagtttgagtctgttgagt
tccggttcaatgatggtcgatccggacattgacgaggctcacaaattgcgaggctggttc
aatgctgttggacagagtgctaccttctctacgcatcagaacatggtgtccactactggt
ggttccaagaacgacgcaaagccaatttcggccatcatcgaggaagaggcttatctccaa
gataccccctcatacatgagtcttcgtgcatcggtcctgtacgtcaaagattcgactttc
gcatatcctgcgtgttcgacacaaggctgtaacaagaaagtcattgaagaaaaccctggc
tcttggtggtgcgagaagtgccaggctactttccctgagcccaattaccgctatgtgctc
agtgccaacgttggggatcataccggaacgttgtggctcagttgctttgacgaagcgggc
caaacaatcgttggcatgtcagcaaacgaagctatgaagatgaagatggatgacgaagaa
aatggtacgagaaactttgtaaatgtcatgcaggaagcgacctgtaagaccttcaacttt
cgagtgcgtgcgaagatggagacgtaccaggaccaacccaagccacgataccaagtcatg
aacatatacccactcaactttgcccaggaggctaataagctcgcccagcttatcaagcag
taccacatgaacgaggatagtttgtttgtcaactaa
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integrated database retrieval system
