Bipolaris sorokiniana: COCSADRAFT_140681
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Entry
COCSADRAFT_140681 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsc03016
]
COCSADRAFT_140681
Enzymes [BR:
bsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
COCSADRAFT_140681
Transfer RNA biogenesis [BR:
bsc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCSADRAFT_140681
Prokaryotic type
COCSADRAFT_140681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5543
Motif
Other DBs
NCBI-GeneID:
19131175
NCBI-ProteinID:
XP_007699267
JGI:
Cocsa1_140681
UniProt:
M2T6R7
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MDSEGEKVLEGIFAVAKPANVSSADVLLKLQETFAPSATFAPLLRTQPKRTSKSSNQVFR
LGHGGTLDPLAAGVLIVGIGRGTKQLSNYLSCRKTYETVVLFGASTDTYDCTGSVTQEAG
YSHVTKELVDEKLGGFRGTIQQLPPLYSALKINGIKACEYARQRRDLPRELESREMHVDE
CTLLEWYEPGQHDFAWPGKVEPASAPAAKIRLTVCSGFYVRSFAHDLGGSCDTCSHMVSL
LRTRQADFTTSNPPEPSSLTSTLTYADLEAGEHAWGPKLRPQLDRWVTAHPVVQGHVNGR
DASVKRKTEEQQARPRQRFRGEWVASTKKERIKQQGGKFKGKWGRKLATDREANDNTSNQ
SIVPVINDQKP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagggtgagaaagtcctggaaggtatcttcgctgttgccaagccagcaaac
gtctcgtctgcagatgttctcctcaaattgcaggaaacttttgcgccatcagccacattt
gcgccactgctcaggacgcaacccaagcgtaccagcaaatcgtctaatcaggtgtttcgt
ctcggacacggcgggactctggatcccttggctgctggagttcttattgtgggcatcggc
cgtggcactaaacaactctctaattatctatcttgcagaaagacttatgagacagttgtg
ctgttcggcgcaagcacggatacttacgactgtactggctccgtaacccaggaagcggga
tactcgcacgtgacaaaagaattggttgatgagaagcttgggggtttcagaggaacaata
cagcaactgccccctctgtactcggcattgaagatcaatggtatcaaggcttgcgagtac
gcgcgtcagaggagggacctgccacgagagctggagagccgagaaatgcatgttgacgag
tgtacgctgctggaatggtacgagccgggccagcatgactttgcatggccgggcaaggtc
gagcccgcttcagcacctgccgcgaaaatacgactgacggtatgctcgggcttttacgtt
cgcagttttgcacacgacctcggcggttcatgtgatacatgctcgcacatggtatcttta
cttcgaacaagacaagctgatttcaccacatcaaacccacctgagccgtcaagtttgaca
agcacgctaacatatgcggatctggaagctggcgaacacgcctgggggccgaagcttaga
ccacaacttgatcgctgggtcactgcccatccggtcgtccaagggcatgtcaatggaagg
gatgcaagtgtgaagcgcaagaccgaagagcagcaagcaagaccgaggcaacggttccgt
ggagagtgggtggcaagcacaaagaaagagaggattaaacagcaaggaggcaaattcaag
ggcaaatggggaagaaagcttgcgaccgacagggaggcaaatgacaacaccagtaaccag
tcgatagtgcctgtgattaacgatcaaaagccatga
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integrated database retrieval system
