KEGG   Bipolaris sorokiniana: COCSADRAFT_147133
Entry
COCSADRAFT_147133 CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K13174  THO complex subunit 5
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03013  Nucleocytoplasmic transport
bsc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSADRAFT_147133
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCSADRAFT_147133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsc03019]
    COCSADRAFT_147133
   03041 Spliceosome [BR:bsc03041]
    COCSADRAFT_147133
Messenger RNA biogenesis [BR:bsc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     COCSADRAFT_147133
Spliceosome [BR:bsc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    COCSADRAFT_147133
SSDB
Motif
Pfam: FmiP_Thoc5 DUF7916 YuzK DUF349
Other DBs
NCBI-GeneID: 19131404
NCBI-ProteinID: XP_007702289
JGI: Cocsa1_147133
UniProt: M2SHN3
LinkDB
Position
Unknown
AA seq 239 aa
MTDQQVSLPEPGEAMPADLSTFNMADLVKTPHNARLYQEVQNLKKLINELVDFQLAHPKI
SKAESREDIDNEKKAMREIEKREKYIRAQLSIIKTLYRQSVLKVREEKAKTSDDRAVNDA
LILGLHNLKYEEQSLRSEISAAENYDHKYMKLPLIPLEEFLEEFPEHKESTEHDLMTARI
EHEHQVRLKLEERRQEKLKQKQKLIAEVKKGKDDLTKLDTMVEKFIEAAEPIKKVLSIE
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaccgaccaacaagtttcgctcccagaacccggtgaggctatgccggcggatctgtct
actttcaacatggccgatcttgtaaagacgccgcataatgcgcgtctataccaggaagtg
cagaatctcaagaagctcatcaacgaactagtagacttccagctcgctcaccccaaaatc
tcaaaggcggaatcacgcgaggacattgacaatgagaaaaaggcgatgcgcgagatcgaa
aagagggaaaagtacatccgcgcacaactgtccatcatcaagactctttataggcagagt
gtactcaaggtgcgcgaagagaaagccaaaacatcagacgacagagctgtcaacgatgcg
ctcattctgggtctgcacaacttgaagtatgaggagcagtcgctgcgctcagagatctct
gccgctgaaaactatgatcacaagtacatgaaattacccctgattcccctcgaagaattc
cttgaagaattccctgaacacaaggaatccaccgaacacgacctcatgacggcgcgcatt
gagcacgaacaccaagtccgtctcaagctggaagagcgccgacaggagaagctcaagcag
aaacaaaagcttattgccgaggttaaaaagggcaaagatgatctgaccaagcttgacaca
atggttgagaagtttatcgaggctgcagagccgatcaagaaagtgctgtcgatagagtag

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