Bipolaris sorokiniana: COCSADRAFT_147133
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Entry
COCSADRAFT_147133 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03013
Nucleocytoplasmic transport
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_147133
09122 Translation
03013 Nucleocytoplasmic transport
COCSADRAFT_147133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_147133
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_147133
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
COCSADRAFT_147133
Spliceosome [BR:
bsc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
COCSADRAFT_147133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF7916
YuzK
DUF349
Motif
Other DBs
NCBI-GeneID:
19131404
NCBI-ProteinID:
XP_007702289
JGI:
Cocsa1_147133
UniProt:
M2SHN3
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MTDQQVSLPEPGEAMPADLSTFNMADLVKTPHNARLYQEVQNLKKLINELVDFQLAHPKI
SKAESREDIDNEKKAMREIEKREKYIRAQLSIIKTLYRQSVLKVREEKAKTSDDRAVNDA
LILGLHNLKYEEQSLRSEISAAENYDHKYMKLPLIPLEEFLEEFPEHKESTEHDLMTARI
EHEHQVRLKLEERRQEKLKQKQKLIAEVKKGKDDLTKLDTMVEKFIEAAEPIKKVLSIE
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccaacaagtttcgctcccagaacccggtgaggctatgccggcggatctgtct
actttcaacatggccgatcttgtaaagacgccgcataatgcgcgtctataccaggaagtg
cagaatctcaagaagctcatcaacgaactagtagacttccagctcgctcaccccaaaatc
tcaaaggcggaatcacgcgaggacattgacaatgagaaaaaggcgatgcgcgagatcgaa
aagagggaaaagtacatccgcgcacaactgtccatcatcaagactctttataggcagagt
gtactcaaggtgcgcgaagagaaagccaaaacatcagacgacagagctgtcaacgatgcg
ctcattctgggtctgcacaacttgaagtatgaggagcagtcgctgcgctcagagatctct
gccgctgaaaactatgatcacaagtacatgaaattacccctgattcccctcgaagaattc
cttgaagaattccctgaacacaaggaatccaccgaacacgacctcatgacggcgcgcatt
gagcacgaacaccaagtccgtctcaagctggaagagcgccgacaggagaagctcaagcag
aaacaaaagcttattgccgaggttaaaaagggcaaagatgatctgaccaagcttgacaca
atggttgagaagtttatcgaggctgcagagccgatcaagaaagtgctgtcgatagagtag
DBGET
integrated database retrieval system