Bipolaris sorokiniana: COCSADRAFT_147685
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Entry
COCSADRAFT_147685 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_147685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_147685
Spliceosome [BR:
bsc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
COCSADRAFT_147685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
19131424
NCBI-ProteinID:
XP_007702472
JGI:
Cocsa1_147685
UniProt:
M2R4U7
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MSKRPALEPLEEMYDAPSPAMKRPKVEDEEMEDSDTNGATSNGHLMAPRPQDQDKIDILE
EAGALDDEDGDEPAVAAPKRQSAPEAGYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYA
CLVCGKYYQGRGPKSQAYFHALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIKFVVDP
RMSKEEVAKLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFML
EDLSNRPQLAQRFSTLVRKIWNPRAFKTHVSPHELLQEIALRSSKRFTLTDQSDPVDFLS
WFLNNLHLAVGGSRTKPHSSIIQKVFQGTLKIEQQEITARADAGDRLRFEDAAVQTTTSH
FLVLTLDLPAAPLFQDALEKNIIPQVPLVNILSKYNGVTPQEKSKNRVRYRLLHPLPPYL
LFNIKRFSKNKFVAERNPTIVTFPVHSLDMSPYVEPNPAEYPPGEPIWYDLVANITHEAV
KKKDDSVEGELESKIWRVQVKDRAREEWYGIQDLFVEKERAETLFTKEAYLMVWERRKGQ
GGRGKGRA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgaccggccctggagcctctcgaggaaatgtacgacgcgccgtcgccagct
atgaagcgcccaaaagtcgaggatgaagagatggaagactccgatacaaacggcgcgact
agcaatggccacctcatggctcctcgaccgcaagaccaagacaagatagacattcttgaa
gaagccggcgcattggacgacgaagacggtgacgagcccgcagtcgccgcgccgaaacgc
cagagtgcgccagaagctggatacaccgatctttacctcgacacgataaaccgcaaagtc
ctcgactttgactttgagaagctatgctccgtcacgctgtccaatatcaacgtatacgcc
tgtctcgtatgtgggaaatactaccaaggtcgggggccaaaatcacaagcatactttcat
gcgctggaagagggacaccatgtatacgtcaacatggagacgaagaaggtctatgtgctt
ccagagggctatgaagtgacttccaagtcgctagacgacatcaagtttgtcgtagacccg
cgcatgagcaaggaggaggtagcgaagttagacaaggagcctaaggtgtcatgggatctg
tcaaatcgcgaatacataccaggttttgtgggcatgaacaacatcaaggcaaacgactac
ttcaacgtagtaatacaagccctctcccacgtcgtcccactacgaaactactttatgctc
gaagacctctcaaaccgaccgcaactcgcccagcgcttcagcactctcgtccgcaagatc
tggaacccgcgcgccttcaaaacccacgtctcaccgcacgagctcctccaagaaatcgcc
ctccgctcctccaaacgcttcaccctaaccgaccaatccgaccccgtcgacttcctctcc
tggttcctcaacaacctccacctcgccgtcggcggctcccgcacaaaaccccacagcagc
atcatccaaaaagtcttccaaggcaccctcaaaatcgaacaacaagaaatcaccgctcgc
gcagacgccggcgaccgcctccgcttcgaagacgccgccgtccaaaccactacctcacac
ttcctcgtcctaaccctcgacctccccgccgcgccccttttccaagacgccctagagaaa
aacataatcccccaagtccccctcgtaaacatcctctcaaaatacaacggcgtgactccg
caggaaaaatcaaaaaaccgcgtccgataccgtcttttacaccccttgcccccatatctt
ctattcaacatcaaacgcttctccaaaaataaattcgtagcagaacgcaacccaaccatt
gtcaccttccccgtccactccctcgacatgtctccttatgtcgaaccgaatcccgctgag
tacccgcccggcgaacccatctggtacgatctcgtggccaacattacgcatgaggctgtc
aagaagaaagatgatagtgtggagggggaactggaaagcaagatttggagggtgcaggtt
aaggatcgggcgagggaggagtggtatgggattcaggatttgtttgtggagaaggagagg
gcggagacgctgtttacgaaggaggcgtatttgatggtttgggagaggaggaaggggcag
gggggacgggggaaggggagggcttga
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