Bipolaris sorokiniana: COCSADRAFT_151357
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Entry
COCSADRAFT_151357 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14300
nuclear pore complex protein Nup133
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSADRAFT_151357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_151357
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_151357
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCSADRAFT_151357
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
COCSADRAFT_151357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
19131555
NCBI-ProteinID:
XP_007704308
JGI:
Cocsa1_151357
UniProt:
M2SC70
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MFSPEASIQSARSSLRNPRRRQRKDSDGPQQQRSRKRSKLNDEAFKDPAGAHMNGNGSVQ
INGHAVQSVENSVVLVDMPVREKKTAPKQRAPKEETGSYLTKNANYSVKKLPGFPSALLR
PSTPIYATALPSAGLALALTSDRALIWDYSAPNGPTKVVSLNLGFGLRPSEPLPLGAIVR
NGPTNDFGVVALAPSTGKISFWESIDSADTRSLYPQRQQGVEGFVKLYSGETITDLVDVE
HAGYVLVFSSGRLAQLTLRDSQGRPNVVTTVLSAPNSSGGSFFSLKGLLGGSIRKTIASV
KARTSQSKGHMDVISATKNGLFQLWDLSWSGQHSHHRDVDVHDTILSVLQVNTVPEIRNQ
QDVHVLDFAIVEQQQRHDVVELLVLVALSGRDSMDYSLLELVLSGAGGTVNRVIPLRNFH
QPQLPKEPTGTLLVPQPGHTAYVQFPGAMCVTALTRPEESPEAQLLADAGRPSLPFQDTI
YFRPDVTISGNALEIALRKDRRATALIFVQQFGLLQISALSPTTDEQDNERAKVTALSKL
EQATFFSTIPGNIIDFSVKSRFSFPEEETAEAARAISAGILSSSYDYLEKSTSNMDEQFQ
QRTSALQTLISQLQSNYPPLSFDTKWRLLWHAEKLTAAHKLWNWYQDKLQDQQAHPDAYP
EKILMSDIIRALNERYKTPIDPELGETDTIRQFFLKDVDSLGVLIPWGWFYLRTFYMKEG
AKEQGSIMQRLSEGTDVMLVALEAAFKFRQANVELYGLDGDCLDDGILRPEEGYDLLPQF
WTSSHNIVSSIRSLIDVGRNLAVENYEEGYQEILAQKIGKDNPRLVKLGCQTHIERFQWA
LAQSDEKTRAMGRSLKDEWNNNVRPSHIMGLMEIGLATEGMKLAEQYRDMPTLVSLIWEE
TNWLESEKASTRSKMEQAESTVKLNRIKERIARYFAIYGDEWAGAFYNKYITENQAGQLF
MKDYLNQPALTKFLRSEPSRVRLAWINDVCGEKDYEAAAEALYEAGSKQETNSWCQRVEL
SMAKLALLCKKEAKEGNEQQSLFDGRREKPKALKMREAMFQSIEQQLEYTKIQEEVYERL
LPVITGALDEDSAVELLMNEFGQGRLKDRPAHQAILKEGFENLVQHKVIDAALMIDILTL
MNADDSEEGTTLLGGDEFVYAFRVLVVSWQNIHRTTREGLLKLVWKRLAIKDDWATINNT
RDITDTRITDVLRDTAVSWTFRALFRMCAENPFARIVWPKSLRDLLGAGGTHGELCVRFA
AEDLREPIIRDNLLDDDILQEHLEKNRLSDWFKEAWKAGRAMYDEELVLEGKAQAAPAEP
ETMVNGAGAETEAEAEIEAEAAGSDTFDGDDESALEQERDVEMLES
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgccagaggcttcgatccagagcgcgcgcagctccctgcgcaatccccgacgc
cgccagcgcaaggactcggacggcccccagcagcaacggagccggaagcgcagtaagctc
aacgatgaagccttcaaggacccagccggcgcgcacatgaatggaaatgggagcgttcag
attaatggccatgcagttcagagcgtcgagaattccgttgttctggttgacatgcccgtc
cgcgagaagaagacagcaccgaagcagcgcgcgcccaaagaagagactggttcatatctt
acaaaaaacgcaaactacagcgtaaagaaactccccggttttccatcagcgcttctccgc
ccttcgacccccatatatgcaaccgcactcccctcggctggtctcgcactcgccctgact
tcggatcgagccctcatctgggactacagcgccccgaacggccctacaaaggtcgtctcc
ttaaatctgggctttggcctaagaccatccgagcctctgccactaggtgccatcgtgcgc
aacggccccacaaacgacttcggtgtcgtcgcactcgcgccttcgacaggcaaaatcagt
ttctgggagagcatcgacagcgccgatacccgaagcctctatccccagcgccaacaagga
gtggagggcttcgtcaagctatactctggagaaaccataaccgacctggtagacgtcgag
catgcgggctatgtcctggtcttcagcagcggcaggttggctcaacttaccctgcgcgac
tcgcaaggcaggcccaacgttgtaaccaccgttttgagcgcgcccaacagttcgggtggt
agcttcttcagcctcaagggcctgttgggaggatcgattcgcaaaaccattgcctcagtc
aaggcccgtacttcgcagtcaaaaggccacatggatgtcatatctgcaacaaagaacggt
ctctttcagctttgggatttgagctggtcaggacaacatagccatcatcgggatgtggat
gtacacgatacaattctttcggtgctccaggttaacacagtgccggagatacgcaatcag
caggatgtgcatgtgctggactttgcaatcgtcgaacaacagcagaggcatgacgttgtt
gagcttctcgtgttggtggccttgtctggtcgagattcgatggattattctctcctcgaa
ctggtcttatcaggagctgggggcacagtcaacagggtgattccgcttcgcaactttcac
caaccccaactaccaaaggagcccaccggaaccctgttggtcccgcaacccggacacacc
gcgtatgttcagttcccaggcgccatgtgtgtgactgccctcacccgacccgaagaaagc
cctgaagcacaactactggcagatgccggacgacccagcctgccttttcaggacacaata
tacttccgcccagatgtaacgatatctggaaatgccctggagatagcactacgaaaagac
agacgagcgaccgcactcatctttgtccaacaattcggacttttgcagatcagtgcgcta
tcacccactacggacgaacaggataatgagcgagctaaggtcacggcactcagcaaactt
gagcaagcgacattcttcagcactattcctggcaacattattgacttttccgtgaagtca
cggttttcgtttccagaagaagagactgcggaggcggcgcgtgccattagcgctggtatt
ttgagctcgtcctacgactacctggagaagagcacctcaaacatggacgaacaattccag
caacgcactagcgccctgcaaactttgatctcgcaactgcaaagcaattacccaccgctg
tcttttgatacaaagtggcggctcctttggcacgcggaaaagttaacggctgcacataag
ctgtggaattggtaccaggacaaactgcaggatcagcaagctcatccagacgcgtatccg
gaaaagattctaatgagcgatatcattagagccctgaatgagcgctacaagacgcccatc
gaccctgagcttggcgagaccgataccatccgacaattcttcctcaaggatgtcgactct
ctgggtgtattgattccttggggctggttctacctgcgaaccttttatatgaaagagggc
gcaaaggaacaggggtcgattatgcagaggctcagtgagggtactgatgtcatgcttgtg
gctttggaggctgcttttaagtttcggcaagccaatgtggaactgtatgggctcgatggt
gattgcctcgacgacggcattctcagaccagaagaaggctacgacctgcttccccagttc
tggacgtcgtctcacaacattgtcagctcaattcgtagcctcattgacgttggccggaat
ctcgcggtggaaaactacgaagaaggctaccaagagattcttgcgcaaaagattggcaaa
gacaatcctcgcctggtgaagctgggttgtcaaacgcatatcgaacgcttccaatgggct
cttgcgcagagtgacgagaagacgcgagcaatgggccgcagcctcaaggacgaatggaac
aacaatgtccgaccatcgcacattatgggcttgatggagattgggctcgcaacagaagga
atgaagctggctgaacagtaccgggatatgcccacgctggtgagcctcatttgggaagag
acgaactggctcgaatcagaaaaggcgagcacacgcagcaagatggagcaggcggaaagc
acagtcaagctcaacaggatcaaggagcgtatcgcgcgctactttgccatctacggcgac
gagtgggctggagctttctacaacaagtacattaccgagaaccaagcgggccagctgttc
atgaaagactacctcaaccaaccagcgcttaccaagtttttgcgctccgaaccttcgcgc
gtgcggctcgcgtggatcaacgatgtgtgcggcgagaaggattacgaggccgcagctgag
gcactgtacgaggctggttcgaagcaggagactaactcgtggtgtcagcgtgtggagctg
tccatggccaagctcgctctcctgtgcaagaaggaggcgaaggagggcaacgaacagcaa
tcactgtttgatgggcgccgggagaagccaaaggctttgaagatgcgcgaagccatgttt
cagagcatcgaacagcagttggagtacaccaagatccaagaggaagtctacgagcgactg
ctccccgtcatcacgggtgctctagacgaggactctgccgtcgaactgttgatgaatgag
tttggtcaaggccgtctcaaggacaggccagcgcatcaggcgattctcaaggaaggcttt
gagaatcttgtgcagcacaaggtgattgatgcggccctcatgattgacattcttacattg
atgaatgcggatgacagcgaggagggtacgactctgctgggaggagacgagttcgtctac
gcctttagagttctggttgtgagctggcaaaacattcatcgaacgacacgcgaaggccta
ctgaagctggtgtggaagcgattggctatcaaagatgactgggctacgatcaacaacacg
agggacattacggacactaggatcactgatgtgctccgggatactgcagtatcatggaca
ttccgggccttgttcaggatgtgtgccgagaacccatttgctcggattgtatggcccaag
agcctgcgggatcttctgggagccgggggtacgcatggcgagctttgcgtgcgctttgca
gccgaggatctccgcgagcccattatcagggacaacctgcttgacgacgatattctacaa
gagcacttggagaagaacaggcttagtgactggttcaaggaagcatggaaggcgggcagg
gcaatgtatgacgaggagctagtgctcgagggcaaagcgcaagcggcgcctgccgagccc
gagacgatggtcaatggggcaggggcagagacagaagcagaggcagagattgaggcagaa
gcagcagggtcggatacatttgatggagacgatgagagcgcgttagagcaggaacgcgat
gttgagatgttggagtcgtga
DBGET
integrated database retrieval system