Bipolaris sorokiniana: COCSADRAFT_156488
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Entry
COCSADRAFT_156488 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSADRAFT_156488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bsc03000
]
COCSADRAFT_156488
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_156488
Transcription factors [BR:
bsc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
COCSADRAFT_156488
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCSADRAFT_156488
RNA polymerase III system
TFIIIB
COCSADRAFT_156488
RNA polymerase I system
SL1/TIF-1B
COCSADRAFT_156488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
19131765
NCBI-ProteinID:
XP_007695742
JGI:
Cocsa1_156488
UniProt:
M2TH23
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MDPNSLTSHPSTAAQAQTFVAPGSLSYPQGANLDMTAPSTEHNTQQVAENANGVATPAAT
PDTQNGQVPSGIVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKT
TALVFASGKMVVTGAKSEDDSRLASRKYARIIQKLGFSAKFTDFKIQNIVGSCDIRFPIR
LEGLASRHHTFSSYEPELFPGLIYRMMKPRIVLLIFVSGKIVLTGAKVREEIYQAFELIY
PVLSDFRKS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaactctctcacctctcatccgtccaccgccgcacaggctcagacgttcgtc
gcccctggctctctctcctaccctcaaggcgcgaacttggacatgactgcaccctccact
gagcacaacactcaacaggtcgctgaaaacgcgaacggtgttgctactcccgcggctaca
cccgatacccagaatggtcaagtgccctctggtatcgtgcctactcttcagaatattgtc
gctaccgtcaacctctccgctcgccttgacctcaagaccattgctcttcacgcccgcaac
gccgagtacaatcccaagcgttttgctgccgtcatcatgcgtattcgtgagccaaagaca
acggctctggtctttgcgagtggaaagatggtcgtcactggtgccaagtctgaagatgat
agccgtcttgcttcccgcaaatatgcgcggatcatccagaagctggggttcagtgccaag
ttcaccgactttaagatccagaacattgtcggctcttgcgatatccgcttccccatccgt
ctcgagggtcttgcctcgcgccatcacactttctcgtcctacgagcctgaactgttccct
ggtctcatctaccgtatgatgaagcctaggattgttcttctcatcttcgtctctggcaag
atcgtcctcaccggagcaaaggtccgtgaggagatctaccaggcgtttgagctcatctac
ccagtcttgtcggacttccgcaagtcttga
DBGET
integrated database retrieval system