Bipolaris sorokiniana: COCSADRAFT_158414
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Entry
COCSADRAFT_158414 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bsc04131
]
COCSADRAFT_158414
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bsc04147
]
COCSADRAFT_158414
Membrane trafficking [BR:
bsc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
COCSADRAFT_158414
Exosome [BR:
bsc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSADRAFT_158414
Exosomal proteins of bladder cancer cells
COCSADRAFT_158414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
TPR_COPA_B
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_RFWD3
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
19131894
NCBI-ProteinID:
XP_007697819
JGI:
Cocsa1_158414
UniProt:
M2SGB6
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGVDFH
KTQPLFVSGGDDYKIKVWSYQTRRCLFTLNGHLDYVRTVFFHHELPWILSSSDDQTIRIW
NWQNRSLICTMTGHNHYTMCAQFHPKEDLIVSASLDQSVRVWDISGLRKKHSAPQAMSFE
DQMARTNQNQADMFGNTDAVVKFVLEGHDRGVNWVAFHPTLPLIVSAGDDRLVKLWRMSE
TKAWEVDTCRGHFQNASACLFHPHQDLILSVGEDKTIRVWDLNRRTSVQSFKRENDRFWV
IAAHPEINLFAAGHDNGVMVFKLERERPASAVHQNNLFYITKEKHVRSYDFQKNLESPSM
LSLKKLGSAWVPPRTLSYNPAERSILVTSPADSGTYELISLPRDASGAVEPTDTKRGSGN
SAVFVARNRFAVFNQSNQQIDIKDLNNNSTKTIKPPNGTTDIYFGGTGNLLLITPTSVVL
YDIQAKKNLAELSVNGVKYVVLSSDGLHVALLSKHNVTIATKNLEQVSTLHETIRIKSAV
FDDTGVLLYSTLNHIKYSLMNGDNGIVRTLEQTVYLVRVKGRNIYCLDRAAKPKILQIDP
TEYRFKLALVKRNYDEMLNIIKTSSLVGQSIISYLQKKGYPEIALQFVQDPQTRFELAIE
CGNLEVAVEMAKQLDRPKLWQRLSNEALAHGNHQTVEMTYQKLRNFDKLSFLYLTTGDQD
KLKRMAKIAEHRGDMTARFQNALYLGDVQNRIEMFQELDLYPLAYATAKAQGLEEQAQSI
LEAAGVSEDQIKLPSIGSPLAPVKPIVPTYQANWPTRAASSTVFEKALQGEVEGIGSEEP
AANGYGDEDLLGETEPTGAAADLGGDEEDDIGGWDMGDDAEVEAEDDFVEVEGAEVGAGS
SEADLWARNSPLAADHVAAGSFDTAMQLLNRQVGAVNFAPLEERFQEIYQATRTFLPATP
NMPSLVNYVRRTVDETDSRKILPIIPRDLESILSNDLTAGKQALVKNKLEDGIATFRKLL
QLIMVNVVSSQAELSDARKAINTATQYILAMTIELERRKLLNGATDISALSDADKKRVLE
LSAYFTIPEVEGPHKSIPLSAAMNFAHKNKQLNTALNFANALLDRTGNAKMKESAKRVKT
ISERNPSDAIEIDFDQFADFDICAASLTPIYAGQPSVTSPYSGAKYHAKYKGTVCKIDGI
SQIGAPASGLRLVG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagttcgagtcaaagtcctcgcgtgcaaagggcatcgctttccacccaaaa
aggccatggatcctcgtatcactgcactcgtcgactatccagctatgggactaccgcatg
ggaacactcattgaccgcttcgaagaacacgacgggccggtccgcggcgttgacttccac
aagacgcagccattgtttgtctcgggcggtgatgattacaagatcaaggtctggtcatat
cagacgcggcgttgtctcttcacattgaacggccacttggactatgtccgaaccgtcttc
ttccaccacgagctgccatggatattgagtagctccgacgaccagaccatccgtatatgg
aattggcaaaatcgttcactgatctgcaccatgaccggccacaaccactacaccatgtgt
gcgcagttccatcccaaggaagatttgattgtttccgcctcgctcgatcagtccgttcgt
gtctgggacatctcagggttgagaaagaagcattcggcaccacaggccatgtcctttgag
gaccagatggcacgcaccaaccagaaccaagcagacatgttcggaaacacagatgccgtt
gtcaaattcgtccttgaaggccacgaccgaggtgtgaactgggtcgcattccaccccaca
ttgccattgattgtttccgcgggtgacgatcgtctagtcaagttgtggaggatgtcagaa
acaaaggcgtgggaggtggacacttgtcggggacatttccagaacgcatctgcgtgtttg
ttccacccccaccaggacttgatactctcggttggcgaggacaagacgatccgtgtatgg
gatctcaacaggcgaacatcggtccagtctttcaagagggagaatgaccgcttctgggtc
atcgcagcacatcctgagatcaacctgttcgccgctggtcacgataatggagtaatggta
ttcaagctggagcgcgagcgacccgcatccgctgtgcaccagaacaacctcttctacatt
accaaggagaagcatgtgcgctcgtatgatttccaaaagaacctcgaatcaccgtcaatg
ctgtctctcaagaagctgggaagcgcctgggtacctccacggacactctcctacaaccct
gctgaacgttcaatcctggtcacatctccagcggatagtggaacatacgagctcatcagc
cttccacgcgacgcttcaggggcagtagaacctacggacaccaagcgcggctctggaaac
tctgctgtatttgtggctaggaaccgatttgcagtcttcaaccagtccaaccagcagatt
gacatcaaggacctcaacaacaactccaccaagaccatcaagcctcctaatggaacaacc
gacatctactttggtggaaccggcaacctgctcttgattacacctacctctgttgttctt
tatgacatccaggccaagaagaaccttgctgagctgtctgtgaatggcgtaaagtatgtt
gtcttgtcatcggatggactgcatgtggctctcttgagtaagcacaatgtcacaattgcg
acaaagaacttggagcaggttagcactctgcatgagacgattcgtatcaagagtgcagtc
tttgacgatactggagtcttgctttactctaccctgaaccacatcaagtacagtttgatg
aatggcgacaacggaattgtccgcactctcgaacaaaccgtatatctcgtcagggttaag
ggccgcaacatatactgcctggaccgagccgcgaaacccaagatcctccagattgaccct
accgagtatcgattcaagcttgcccttgtaaagcgaaactacgacgagatgctcaacatt
atcaagacttcaagcttggttggacagagtatcatctcctacctccaaaagaagggatat
cctgagattgctcttcagttcgttcaggatccccagacacgattcgagcttgccattgaa
tgcggcaaccttgaggttgcggtagaaatggcaaagcaacttgatcgccccaagctctgg
cagcgattgagcaacgaagcattggcacacggcaaccatcaaaccgtagaaatgacatat
cagaagctacggaactttgataagctgtcattcctctaccttacaacaggtgatcaggac
aagctgaagcgcatggccaagattgcagagcatcgcggggacatgaccgcccgattccag
aacgcactctacttgggtgacgtgcagaatcggatagaaatgttccaggagcttgacctg
tacccactcgcatatgctaccgccaaagcccaaggcctcgaggaacaagcacagtcaatc
ttggaagctgcaggtgtctcggaagaccagatcaagctgccttcgataggcagccctctc
gcacctgtaaagcccatcgtcccgacttaccaggcaaactggccgacgcgcgcggcttct
tcaactgtcttcgagaaggctcttcaaggcgaggttgaaggcattggatccgaggagcct
gcagccaacggctatggtgatgaggatctgctcggcgaaacagaacccaccggtgctgca
gccgaccttggaggtgacgaagaagatgacatcggcggatgggacatgggcgatgatgcc
gaggttgaagcagaggacgatttcgtcgaggttgagggtgctgaagttggtgctggaagc
agcgaagccgacctctgggcacggaactcacctttggcagcggaccacgtcgcggcaggc
tcctttgacaccgccatgcagctactcaaccgccaagtcggtgcagtcaactttgcccct
ctcgaggagcgcttccaagagatctaccaagcgacacggacatttttgcccgctacgccc
aacatgccatcattggtcaactatgtgcgaaggacagtggacgagaccgactcgcggaaa
atcttgccgattattccacgggatttggaatctatactatctaatgacttgactgccggc
aagcaagctctggtcaagaacaagctggaagatggtattgcgacattcaggaagctactg
cagctcatcatggtcaacgttgtctcgtctcaagccgagctctctgacgcaaggaaggcg
atcaacactgctacccaatacattctcgctatgaccattgagctggagcgccgcaaactg
ctcaatggcgctacggacatttccgctctctccgacgcggacaagaagcgtgtcctagag
ctatcagcctactttaccatccccgaggtcgaaggcccacacaagtcgatcccgctttcc
gcggccatgaactttgcacacaaaaacaagcagctgaacactgcgctcaactttgcgaat
gccctgcttgaccgcaccggcaacgccaagatgaaggagtcagccaagcgggtcaagacg
atttccgagaggaatcccagcgacgcgattgagattgactttgaccagtttgccgacttt
gacatttgcgctgctagtctgacgcccatctacgctggacagccatcggtcacgagtcca
tacagcggagccaagtaccacgctaagtacaagggtaccgtgtgcaagattgatggcatc
agccagattggagcaccggccagtggactacgacttgttggatga
DBGET
integrated database retrieval system
