Bipolaris sorokiniana: COCSADRAFT_161783
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Entry
COCSADRAFT_161783 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03013
Nucleocytoplasmic transport
bsc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSADRAFT_161783
03015 mRNA surveillance pathway
COCSADRAFT_161783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_161783
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_161783
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
COCSADRAFT_161783
Spliceosome [BR:
bsc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
COCSADRAFT_161783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
19132124
NCBI-ProteinID:
XP_007701469
JGI:
Cocsa1_161783
UniProt:
M2R8K0
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MALSIDQKRLKATKFPPEFDKKVDIEKVNIDLMKRWIANKITTILGDEDDIVVETCYNLV
EQSQFPKIKEIQIQLTGFLGKDTAPFCKELWDLMLSAQDSPMGVPRELLEAKKAELQQEQ
LSKAAADARRAEDQAQNAMIDSFRQSERSDRPERGRGGGGGRYRGSDREEGILHRIASAT
CIYLEEAEVAVVEGVTIGLASAVVPLRAAVLHPHHLVVHVAHHRQDHHEVHPGAEHVARH
RLIALGLRLAVRDGDLLQEATLRPRDGEEHARTGLGLLAKIREGYLGIIRDLVLLVINRA
HQRPGSERGHHHIALHAVDVALLRGPPDP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagtatcgaccaaaagcgccttaaagcgaccaaattcccgccagagtttgac
aagaaggtggatatcgagaaagtcaacatcgacctaatgaaaagatggattgccaataag
ataactaccatcttgggcgatgaagatgacattgtggtcgagacctgctacaacttggtt
gagcaaagtcaatttccaaagattaaggaaatccaaatccaacttaccggctttttggga
aaagatacagcgccattctgcaaagagctatgggatctcatgctcagcgcccaagacagt
cccatgggggtaccgcgtgagctcctggaagcaaagaaggctgaattgcagcaggaacag
ctttcgaaggccgctgccgatgcaaggcgcgctgaggaccaagcgcagaatgctatgatc
gactctttccgccaaagcgaacgttcagatcgtcccgaacgtggacgcggtggtggtgga
ggacgataccgcggcagtgaccgagaagaaggcattctccaccgaatcgcgagcgcgact
tgtatatacctggaggaggccgaggtcgcggtcgtggagggcgttacgataggtctcgcg
agcgccgtcgttccccttcgggcagccgttctgcatccccaccacctcgtcgtgcacgtc
gctcaccatcgtcaggaccatcacgaagtccacccaggcgccgaacacgtcgctcgccat
cgcttgatcgctctaggtctccgcctcgccgtacgcgacggagatctccttcaagaagca
actctccgcccccgagacggcgaggagcacgcaaggacaggtcttggtctcctggccaag
ataagagaaggctacctaggcataattcgcgatctagttctcctcgtgataaatcgagct
caccagcgcccaggctccgaacgaggtcaccatcacatagccctccacgccgtcgacgtc
gctctccttcgaggtcctcccgatccataa
DBGET
integrated database retrieval system
