Bipolaris sorokiniana: COCSADRAFT_167796
Help
Entry
COCSADRAFT_167796 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_167796
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_167796
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
COCSADRAFT_167796
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
COCSADRAFT_167796
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
COCSADRAFT_167796
microRNA pathway
RISC loading complex
COCSADRAFT_167796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL2
ArgoL1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
19132534
NCBI-ProteinID:
XP_007696144
JGI:
Cocsa1_167796
UniProt:
M2RPT0
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MLPSNATCLWVVRLISALLVLYSKFFLCFGADFFQNCNIWDLKPLQALPAPTAATPPPSR
TTRTSLKLLPANNLVSTATSDIHTPSRVCRRLGLNTQPTTGPNRNQSSSKSTMAGPVKKR
AEAEKKSSYSSNDSASQSRDFTQRSPKSIPRLDGNRDPSDRKAIDYTVPNDLKNLSEFLG
MRGWYAARGVNIGSDLPARPETFNQNGKPVGITLNTFNVDKAPKTVVHQYDLHFTGDGKD
YTKRVLLKKIWNSNAVKSSLGEANKWIWDTNKLAWSTKRLDRDDTRIAVDLDEEQGRPTK
PGSSGNKHVVHIRWTRQVDFIGLKSFMSGQAAWSNDCIDTLNFLDHVMRMWPSQQYTMIR
KSFFQRGEQRFDLGGGVEAFKGVFTSLRPVLDDKFNKSLSVNVDVANGTFWRAQELTRAI
GQAFSCSPPQFASMFQNALRDWNHSNLKKDLRKFKRIGVSTTHTKEPVQWTIDEFMDKDV
HKATFSDPDDRSKNISVATYFKKKYGIAVMGGVPVVRMTKKIRGQAVYMPIDVLKIDANQ
RYNTKLSDTQTSNMIKFAVTLPKDRWVAVQHGIRLLNWANDPYLSHYGIKISPNAAKVQA
RVLPSPVVHFGPGSKEATIKPTDMIQGRWRLDGRKFVMPNKERPIKAWGICVIQGRGSPP
PTAVESFALKLIQIYEAHGGHILSHPQHGKKPWMGPGNLADGGEMVQKAWNQTGNKYSTP
PNLMMFIVNDRNVDVYRRIKKSCDIRFGVASQVLQAKHVMSASPQYISNVCMKINAKLGG
ATCVAKSQVIPKIAPKAASIPTMVVGADVSHPAPGAGSGEAASFAAITVSADVHFARYWA
EVQTNGNRVEMITTSNIDDHFGYMAKAWMQKIGQGRPPQRVLYIRDGVGEAQYAAVLEEE
VHDMKECFKKLGCKEVPKFTVVIAGKRHHIRFFPEAGKGDRNNNPLPGTLVESGCTHPFE
FDFYLCSHVAIKGTARPIHYHCILNEGDWKAAELQQFIFEHSYQYVRSTTPVSMHPAVYY
AHLAADRSRAHLNESPVSSGKKEAKAEKESSTGSSKQHVQVGPLMPIQNARSLKDVMWYI
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcttccatcgaacgcgacatgtctctgggtggtgaggctcatctctgctcttcttgtc
ctctactcgaaattctttttatgtttcggagctgatttctttcaaaattgcaatatttgg
gacctgaagcctttgcaagccctacctgcaccaacagcagccaccccacctccttcaaga
acaacaagaaccagtctcaagctgcttcctgcaaacaacctagtctcgaccgctacaagt
gacattcacacccccagcagagtctgccggcgactcggtctgaacacgcaacctacaaca
ggtcccaaccgaaaccaatcttcgtccaagtctacaatggctggtccagtgaagaagcgc
gctgaggccgagaagaagtcaagctactcgtcgaacgactcggcttctcagtctcgggac
ttcactcagcgttcccccaagtctatccctcgccttgacggcaatcgcgaccccagcgat
aggaaggcgatcgactatacggtgcccaatgacctcaagaacctttccgagttccttggt
atgcgtggttggtacgccgctcgaggtgtcaacattggaagtgacctacctgcgcgtccc
gagaccttcaaccagaacggcaaacccgtgggcattactctcaacaccttcaatgtcgac
aaggctccaaaaaccgtcgttcaccagtacgatcttcacttcaccggcgacggcaaagac
tataccaagcgcgtcctgctcaagaagatctggaactcgaatgctgtcaagtcatctctg
ggtgaggcaaacaagtggatttgggacaccaacaagcttgcatggtctaccaagcgctta
gatcgtgatgacacacgcattgctgttgatctcgacgaggaacaaggccgtcctacaaaa
cccggcagctctggcaacaagcatgttgtccatattcgctggactcgtcaggtggacttc
atcggcctcaagtcgttcatgagcggtcaagcagcgtggtccaacgactgcattgacacc
ctgaactttctcgatcatgtcatgcgaatgtggccttcccaacagtacaccatgatcagg
aaatcgttcttccagcgaggtgaacaacgattcgaccttggcggaggtgttgaagctttc
aaaggtgtcttcacctcccttcgcccagtcctcgatgacaagttcaacaagtcactgtcc
gtcaacgtcgatgtcgccaatgggacattctggcgtgcccaagagctcacgcgtgctatt
ggccaagcattcagctgtagtcctccacagtttgcgagcatgttccaaaatgcgctccgt
gattggaaccactccaacctcaaaaaggacttgaggaagttcaagcgcatcggcgtatcc
accacacacaccaaggagcctgtgcagtggacgattgatgagttcatggacaaggatgta
cacaaagccacattctcagacccagatgatcgttccaaaaatatttcagtcgctacctac
ttcaagaagaagtacggcatcgccgtcatgggtggtgttccagtggtcaggatgacgaag
aagattcgcggtcaagctgtctatatgccgattgacgtcctcaagattgacgctaatcag
cgttacaacacaaagctcagtgacacgcagacatctaacatgatcaagtttgctgttacc
ctccccaaggatcgctgggtagcggttcaacatggaattcgtctcctcaattgggccaac
gacccctacctcagccactatggaattaaaattagtcctaacgctgcgaaggttcaggct
cgtgtcctaccttcaccagttgttcatttcggtccaggctcaaaggaagccactatcaaa
cctactgatatgatccaaggccgatggaggcttgatggacgaaagttcgtcatgcccaac
aaggagcgcccgatcaaggcttggggcatctgcgttatccaagggcgtggtagtccacca
cccacagctgttgagagcttcgctctcaaacttatccagatctatgaagctcacggagga
catatcctttctcatccccagcatggcaagaagccctggatgggtccaggaaatctggca
gatggcggagagatggtccagaaggcctggaaccagaccggcaacaagtactccacacca
cccaacctgatgatgttcattgtcaacgatcggaacgttgacgtgtaccgccgcatcaag
aagtcttgtgatatccgtttcggcgtggcttcacaagtgctacaggccaagcatgtcatg
tctgcctcaccgcagtacatctccaacgtgtgcatgaagatcaacgccaagctcggcggc
gctacctgtgtcgcaaagtcccaggtaattccgaagatcgcgcccaaggctgcctcgatc
cccacgatggtggtcggcgctgacgtctctcatcctgctccgggagcgggttccggtgaa
gctgcttcatttgctgccatcaccgtgtctgcagacgtccatttcgctagatactgggct
gaggttcagaccaacggaaaccgcgtcgagatgatcacgacctccaacatcgacgatcac
ttcgggtacatggccaaggcttggatgcagaagatcggtcagggtaggcctccgcaacgg
gttctttacattcgcgacggagtcggcgaggcacaatacgctgcagtgcttgaggaagag
gttcatgacatgaaggaatgcttcaagaagttgggctgcaaggaagttcctaagttcact
gttgtgattgccggtaagcgtcaccacatccgcttcttccccgaagctggcaagggtgat
cgcaacaacaaccctcttcccggcacgttggtagagtctggctgcacgcatccgttcgag
ttcgacttttatctctgctcccacgttgccatcaagggtacggcacgtcctatccactac
cactgcatcctgaacgagggtgattggaaggctgccgagcttcagcagttcatcttcgaa
cactcgtaccagtatgtgcgctcgaccaccccagtctcgatgcatccggctgtctactat
gctcacctggctgcggaccgctcacgtgcccatctcaacgagagccctgtctcgtctgga
aagaaggaggccaaggctgagaaggaatcgtcgactggttcctccaagcagcacgtccag
gttggtcctttgatgcctatccagaatgcgcgtagtctcaaggatgtcatgtggtacatc
tag
DBGET
integrated database retrieval system
