Bipolaris sorokiniana: COCSADRAFT_169947
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Entry
COCSADRAFT_169947 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_169947
Enzymes [BR:
bsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
COCSADRAFT_169947
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
COCSADRAFT_169947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Nyv1_longin
Motif
Other DBs
NCBI-GeneID:
19132658
NCBI-ProteinID:
XP_007698609
JGI:
Cocsa1_169947
UniProt:
M2RFD2
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MVRITTWNVNGVRNPFGYKPWSTNRTFNAMFDTLETDIVIMQELKIQRKDLTDDMVLVQG
WDCYFSLPKHKKGYSGVGIFTRQSVCAPIRAEEGVLGALCPPNSTTPYRELPESASIGGY
LTPAQIAALPSDLDAESLDLEGRCLVLEFPAFVLFGVYSPANSNGLRDGFRIGFLIALET
RIRNLTKMGKNVVLTGDLNVSRDLIDTARADEHIRSEGMTHEEYLSTPNRRIFNQLLLNG
KVPGQRDEGREEPVLYDLCREFHPDREGMFTHWEQKINARPSNFGSRIDFILCSITIKDW
FQDANIQEGLMGSDHCPVYAVLKDKVPVLRTSGPDSVEEEVHILDLMNPAGMFKDGVRQR
DYDPAKDVPALSGKLLPEFTKRRNIRDMFSKKSTPPKPNPNPTPAVAQLDVTTKADVAST
ASTAEEQMDRDLALAIEASKADMLADTENKTTFSQSPLKSAEKRRASASASPGKPIKRGK
PGALAVSTKGNKGQQSLKGFFQTHSKSTDPITPNDAAPSVSSLKTTDTPSQNATEMPHPP
SPPSTANESFDSDPRASQEASREGWTKLFSKKAAPRCEHGEHCITLTTKKPGVNCGRQFW
VCPRPIGPSGHKEVGTQWRCGTFIWCSDWKGS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcatcaccacatggaatgtcaacggcgttcgcaacccgtttgggtacaagcca
tggagtacgaatcgcacatttaatgccatgttcgatacattggaaaccgacatcgtgatt
atgcaggagttgaagattcagcgcaaggacctgacggatgatatggtccttgtacaaggt
tgggattgctacttcagtttgcccaagcataagaagggatactctggcgttggaatcttc
acacgacaatccgtatgcgctcctatccgcgctgaagaaggtgtcctaggggctctttgt
cctcccaattcaacaacgccctaccgcgaactcccggaatctgccagtatcggcggctac
cttactcccgcacaaattgcggccctcccctctgacctcgacgccgagagcttagatttg
gaaggccgctgcttggttctcgagtttccggcttttgtcctctttggcgtctacagccca
gcaaacagcaatggcttacgggacgggttccgcattggctttctcatagctctcgaaaca
cggataagaaacttgacgaaaatgggaaagaatgtcgttcttacaggagacctgaatgtt
tccagagacttgattgatacggcgagggcggacgaacacatacggtcggagggcatgaca
catgaagagtatctgagcacgccaaatcgtcgcattttcaaccagctgttgcttaacggc
aaggttccagggcagcgggacgaggggcgagaagagcctgtgctgtacgatttgtgtcgc
gagtttcatcctgatcgcgaaggcatgtttacgcactgggagcagaagattaatgccagg
ccgagtaactttggatcacggatcgacttcattctgtgcagcatcaccatcaaggattgg
ttccaggacgcgaatattcaagaaggattaatgggctcagaccattgccctgtatatgca
gttttgaaagacaaagtaccagtactacgaacgtcaggaccagatagtgtagaagaggag
gtacatattctagacttgatgaacccagcgggcatgttcaaagacggtgtacggcaacgt
gattacgatccagccaaagacgtcccggctcttagcgggaaacttcttccggaattcact
aagaggaggaatattcgggacatgttcagtaaaaagtcaacacccccaaagcctaatcca
aaccctacgcctgcagtagctcagctggacgtcacaacaaaggctgacgtcgcaagtact
gcaagcacagcggaagaacagatggatagagatctggctttggcaattgaggcttccaaa
gcagatatgcttgcagatacggaaaacaaaaccacattttcgcagagtcctctcaaatct
gctgaaaaacgacgtgcatcagcctctgcgtcccctggaaagccaatcaagcgaggcaaa
cctggcgccctagctgtatctaccaaagggaataaggggcaacaatcactcaaaggtttc
ttccagacacacagcaagtctacagatcctattacacccaacgacgcagcgccatcagtc
tcatctctcaaaaccaccgacactccaagtcagaatgctacggaaatgcctcatccacct
tctccaccgtcgacagctaacgaatcctttgattctgatccccgcgcttctcaagaagcg
tcaagggaaggctggacgaagcttttctctaagaaagcagcgccccgatgtgaacatggc
gaacattgcatcactctcacgactaagaaaccaggagtcaactgtggacggcaattttgg
gtatgcccccggccgattgggccttcagggcacaaggaagttgggacgcaatggcgttgt
ggaacgtttatctggtgtagtgattggaaaggcagttga
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