Bipolaris sorokiniana: COCSADRAFT_176435
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Entry
COCSADRAFT_176435 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsc03016
]
COCSADRAFT_176435
Enzymes [BR:
bsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
COCSADRAFT_176435
Transfer RNA biogenesis [BR:
bsc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
COCSADRAFT_176435
Prokaryotic type
COCSADRAFT_176435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
adh_short_C2
adh_short
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
TCAD2
Motif
Other DBs
NCBI-GeneID:
19133033
NCBI-ProteinID:
XP_007705704
JGI:
Cocsa1_176435
UniProt:
M2S809
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MASSQAPVAPLYKNIIISGGARGIGRALTRMMLEAGHHAYVFDIDEEELDHTCKVHLQQY
YADGRLGYAICDLRNVNEIRAKVKEAASFFNDRIDVLINNGGIASPQWKDGKTMEDPSTI
DEWQAYIDTNLTAPFAMSQACVPYMKARASDVEEGAHMQNANNSSPAGPCIIHIGSFRAH
QSDPNQEGYASSKSGLIGLMHSMAISLGHLGIRVNLIAPGRIKVAHESKEGDEKGTDWAS
QISEKDISDHPTNRAGRPKDIADAALYLIEAGFVTDLRENSKNMSCSVEIITTPTADSPG
TALVLRTATKHYVFGSMAEGTQRAMVQQGTRLLKAQDFFLTGRAEWKNMGGLIGMMLTLA
DASTSSYTTSMETFRLAQERGRKAEIPSKPHFDVYGPPNLKHTLGTCRRFIFRKGIPIVA
TEYTNQSPAKDENGVIIPTWQDSNINVWAMSVSPAGSQPDAQAEAEIEERRRHFDTHLNT
FKDFQAPENETPEAREVRYDKIRTATIKFMFDSNWSFDTLVEQHISEVKMPAAMFVRTPK
THSYEPYNGPKPGGSEPLPDITVWTRTPWPGAQILALPPTKPVSECVSYIVRAHPTRGQF
DVARAKELGITPGPQFGQLSKGISVQNANGEWVTPEQVMGADRPGQGIAILDVPSVDYVD
SLVQREELNSPEVMKGIGAIVWMLGPGVAGHPTLTEFMKKLSDVEHVISSIDTAPNRMTN
DSVAIQATRLGQVDPARYSTPVFDNTSVPQKSIYRAGQSASSELPKGVIAADRGLTFALM
PRFTMKKDSISRPFDDEAARRDTAPEVLELAQEAQKVVQSNREDMNKWRQLLARPDTEVI
TLGTGSALPSKYRNVSATLVRVPGIGNYLFDCGENTLGQLARVFPHEELIDVLKNLRVIW
ISHLHADHHLGTAAVIRAWYQVVHNSVPNLQPLGTTVGGIDISAYGLSVISHNGMLQWLH
EYSAIEDFGYSRILPLQITANEQGSSSRLSIMNSFGKEKPKNPEVHRSLYEKFFGFEDIQ
TANVAHCHGSMAVSITFPRSPSDPKAVEPLKVSYSGDCRPSFHFSKIGTNTTVLIHEATF
DDALLGDAKAKKHSTTSEALGIGAKMNAKAVVLTHFSQRYQKIPVLQTVTDGEQEDPLLE
PSKTTEDPAENDDEVDPTLDNADNMDIHPTIAPPSRDTAKPIPTLQCQSSSLAKMEQVVK
IRNNDLKVAIAFDYMRVRIGDICELQYFTDALNTLLLKEAEAEGETVDGEASEGKGSGKR
ASESDGEGQKRNKKKICTSSDSCLLSFLTLIVPSPSSSSSPSSKDNPSN
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtctcaggcaccggtagcacccttgtacaagaacattatcatttctggtggg
gctcgaggcattggccgagcactgaccaggatgatgcttgaggctggtcaccacgcctac
gtcttcgacattgacgaggaggaactcgaccatacatgcaaagtccaccttcagcagtac
tacgcggacggtagactaggatacgccatctgcgaccttcggaacgtgaatgaaatccgg
gccaaagtcaaggaagccgccagcttcttcaacgatcgtatcgatgttctcatcaacaac
ggcggcatcgctagtcctcagtggaaagacggcaagacgatggaagacccctcaacgatt
gatgagtggcaggcgtacatcgataccaatctcactgctccatttgccatgagtcaagca
tgtgttccttacatgaaggcacgagcctcagatgtcgaagagggggcacacatgcagaat
gcaaacaactccagccctgcaggaccgtgtatcatacacattggctcattccgcgcacac
cagtcggatcccaaccaggagggatatgcatcaagcaagtctggtctgattggactgatg
cactcaatggcaatcagtctggggcatctaggtatcagggttaatctcatcgcgcccggt
cgcatcaaggtggcacatgagagcaaggagggcgacgagaaggggacagattgggccagt
cagatcagcgaaaaggatatttcagatcacccaacgaatagagcgggtagaccaaaggac
attgctgatgccgcgctgtatctgattgaggcaggcttcgtgactgacctgagggagaat
tcaaaaaacatgtcctgcagcgttgaaatcatcactacgccgacggccgacagcccaggt
actgcgcttgtgctgcgcacggcaaccaaacactatgtctttggcagcatggcagagggc
acgcagcgtgcaatggtgcaacagggaacgcgcttgttgaaggcacaggatttcttcctc
actggcagggctgaatggaagaatatgggcgggctcattggcatgatgctcacattggct
gacgcgagcaccagctcctacaccacctccatggaaaccttccgactggcccaggagcga
ggcaggaaggccgaaataccgtcgaaaccgcattttgacgtatacggtccccccaacctg
aagcacacactgggcacatgccggaggttcatctttcggaaaggcatacccattgttgct
accgagtacacaaaccagtcaccggctaaggatgagaatggcgtcataattcccacatgg
caagactccaacatcaatgtctgggccatgtcggtctctccagctggttcccaaccagat
gcacaagcagaagccgaaatagaggaacggcgacgacactttgacacgcatctgaacacc
tttaaggacttccaggccccagaaaacgaaactccagaagctcgtgaggtcagatacgat
aagatacggaccgcgaccatcaagttcatgtttgattccaactggagcttcgacactctt
gtcgagcaacacatctcggaagtgaaaatgccagccgctatgtttgttcgtaccccgaaa
actcacagctatgagccttacaatgggccgaagccaggagggtcagaacctctgcccgat
atcacagtgtggacacggacaccttggcctggcgcccagattctggctctcccgccaact
aagcctgtttcagagtgcgtgtcgtacattgtgcgagcgcaccctacccgcggacaattc
gatgttgcgcgtgcgaaggagttgggcatcaccccagggccacaatttggccagctttcc
aaaggcatatcagtccaaaatgctaatggagagtgggtcacaccggaacaagtcatgggt
gcggataggcctggtcaaggaattgctattcttgatgttccctcggtcgattatgttgac
agtcttgttcaacgagaggagctcaactcgccagaagtcatgaagggtatcggagctatc
gtctggatgcttggcccgggcgtggcaggccacccaactctaacagagttcatgaagaaa
ttgagtgacgtggaacatgtcatatcgtctatagatactgcgcctaatcgtatgactaat
gactcggttgccattcaagctacgcgtcttggacaagtagatcctgctagatactccaca
cccgtgtttgacaatactagcgtccctcagaagagtatctacagagccggccagtctgca
tcatctgagctgccaaagggtgttattgctgctgaccgagggttgacctttgcacttatg
ccaagatttaccatgaaaaaagactcgatctcgaggccttttgacgatgaagcggcaaga
cgagacacggcgcccgaggtacttgagttggcccaggaagctcagaaagtagtgcaatcc
aatcgcgaggacatgaacaaatggagacagctcctggcgcgtccagatacagaagttatt
acgcttggtacgggctcggccctaccatcaaagtaccgcaatgtttctgcgactttggtt
cgggtacccggcattggcaactacttgtttgactgcggcgagaacacgctcggacagctt
gcgagagtttttccccatgaggaactcatcgatgttctcaagaatctgagagtgatctgg
atcagccacttgcacgctgaccatcatctggggacagctgccgtgatccgggcctggtac
caagtagtgcacaacagtgtgccaaacctgcaaccactcggcactactgtgggcggcatt
gacatcagcgcttatggtctatccgtcatatcacacaatggtatgcttcaatggctgcat
gagtattctgcgatcgaagatttcggatacagtcgcatcttgccattgcaaatcactgcc
aatgaacagggcagctcttctcgactctcgatcatgaactcgttcggcaaggagaaacca
aaaaacccagaagtgcacagatcattgtatgagaagttctttggtttcgaggatattcag
actgcgaacgtagcgcattgccatggctccatggccgtctcaatcacctttcctcgctca
ccctcggaccccaaagctgtcgagccgctcaaagtcagctactcaggcgactgcagacca
agcttccacttttcaaagattggcacaaacacaactgtactcatccacgaagcaacattt
gacgatgcgctcttgggcgatgccaaagcaaagaagcattcgaccacttccgaagccctg
ggcatcggcgcaaaaatgaacgccaaagcagtcgtcctcacccacttcagccagcgctac
caaaagattcccgtcctacaaaccgtcacagacggcgagcaagaagatcccctcctcgaa
ccgtcaaaaaccaccgaagaccctgccgaaaacgacgacgaagtcgatcccaccctcgac
aacgcagataacatggacatccatcccactatcgccccaccctcgcgcgacaccgcaaaa
cctatccccaccctccagtgccagtcctcgtcgctcgccaaaatggagcaagtagtcaag
atccgcaacaacgacctcaaagtcgccattgcgttcgactacatgcgcgtgcgcatcggc
gatatctgcgagttacagtatttcactgatgcattgaatacgctgttgcttaaggaggcg
gaggcggagggtgagactgtggatggggaggcgagtgaggggaagggtagtgggaagagg
gcgagtgagagtgatggtgaggggcaaaagaggaataagaagaagatttgtacctctagt
gactcatgtcttctttcctttctaacgctcatcgtgccatctccctcatcctcttcttcg
ccctcaagcaaagacaacccctctaactag
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integrated database retrieval system
