KEGG   Bipolaris sorokiniana: COCSADRAFT_177734
Entry
COCSADRAFT_177734 CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    COCSADRAFT_177734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsc03021]
    COCSADRAFT_177734
Enzymes [BR:bsc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     COCSADRAFT_177734
Transcription machinery [BR:bsc03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     COCSADRAFT_177734
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Zea_mays_MuDR
Other DBs
NCBI-GeneID: 19133102
NCBI-ProteinID: XP_007695259
JGI: Cocsa1_177734
UniProt: M2SSE7
LinkDB
Position
Unknown
AA seq 1473 aa
MEAPRTTAKQQVVDRIPARIKHIQFGIYSNQDIVNQAVLEVSDRNVYDLQPAADNTRTLT
ANGPMDTRMGISSKQGTCATCGEGLDTCNGHFGHIKLALPAFHVGYLKHIIEVLNCICKD
CSRVLLDEVERRRYLRSMRRPDMDTLRKGAVTKRILEDCRKKKTCPYCNGLQGTVRKVPG
HPLKIIHNRYDAFNRSTAKTKKAPPGKIEFDQSFETAKSANPDLDKHLKKAVDDMHPLRV
LNLFKKISPEDCELLAMIPEDARPEMLIWEYMPVPPVALRPSVMQEGGATEDDVTNKIGD
ICHISSIIRAGLARGFPLQILMEQWDFLQLQIAMYINSDAPGLKQQGLQKTMRGFSQRLK
GKGGRFRQNLSGKRVDFSGRTVIGPDPNLSIDEVAVPERIAKNLTYPEKVTRYNIDKLRR
LVRNGSNKYPGANYILDDQGPNKDRGKISLIALSRFDTKGERLEGASKRLKIGDIVERHI
EDGDIVLFNRQPSLHKLSILSHRAKVRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEE
ARTEATELMGVKYNLATPKNGTPIIAAIQDFITAAYLLSNKNNFFDRRTFCQIVNYMFNG
EGAFDPDTGKRHPIEIPPPVVWKPQALWTGKQVFNLLMRPYKKCRVLVNLEAACKQFKNT
PDQPPDLNENDAYLVIRNSEVMCGVMDKATVGDGKKDSVFYVMMRDFGPDHAVQGMNRLS
KLSARWLSNNGFSLGISDVTPGEKLNKKKQDLVQEAYAKCDKLIKDFKEGKLQRDPGCDE
EQTMENRIGGILSGVRQAAGDICFEELSRWNSPLLMAKCGSKGSNINVSQMVASVGQQMI
GGARVADGFHHRTLPHFPKAARQPASKGFVSNSFFSGLTPSEFIFHAMSGREGLVDTAVK
TAETGYMSRRLMKSLEDLSAQYDDTVRNSSGTVVQFQYGDDNLDPVDMEGKAKPVHFDRT
FSHAVTSTWDNSESSLTPQEVREYTEARLNAQRNKYPRYALDGVTRLEYRDQTDRGIDQK
ESMRDFLDTVQDYVFKKAQKLETTLAYLGIVQPNDRKDKKQSAADAEKYSLADGIAKISE
RALDTFITLCLTKYHRSRVQPGHAVGAIGAQSIGEPGTQMTLKTFHFAGVAGMSITQGVP
RIKEIINASSTISTPVIACELSNKISESAARIVKARVEKTYLRDVISYVEDVWHPNGAYI
AMRIDWDTINKLFVDVQPYEIAAAINAHKPLKWGKAGANVRISSSIIRVEVPDPNAAKKR
PVKTTRNHKEYFERVQQVKSLIPDVVIKGYPDCSRAIIKKESSPNAQGHYECQLLVEGYG
LQDCMTTPGIEPYNTKSNHVMEVKTVLGIEAARATIVREIGDVMGNMDIDPRHMQLLADV
MTFKGEVFGITRFGLQKTRDSVLQLASFEKTPDHLFEAAARGKTDTIDGVSECIIMGQSV
KLGTGAMQVVRPLFLGEEIGEKRTMFEEGWEAL
NT seq 4422 nt   +upstreamnt  +downstreamnt
atggaggcgccgcgcacgacggccaagcagcaggtcgtcgaccgcatccccgcgcgcata
aagcacatccagtttggcatatactccaaccaggacattgtcaaccaggccgtcctcgaa
gtatccgaccgcaatgtctacgatctccagcccgccgccgacaatacgcgcaccctcacg
gccaacgggcccatggacacgcgcatgggcatatccagcaagcaaggaacctgcgcgaca
tgtggcgagggactcgacacttgcaacggccactttggccacatcaagctggcgctgccc
gcattccacgttggctacttgaagcacattatcgaggtgctcaactgtatatgcaaagac
tgctcccgggtcctgcttgacgaagttgagcgccggagatatctgcgcagcatgcgccgc
ccggacatggacaccctgcgaaaaggcgcagtgactaagaggattctagaagactgtcgc
aagaagaagacctgcccttactgcaacggtctccagggcaccgtacgcaaggtccctggc
catccactcaagattatccacaaccgatacgatgctttcaatcgatccacagccaagacc
aagaaggcgcccccaggaaaaattgaattcgaccagtcgttcgaaaccgcaaagtctgca
aacccagatctggacaagcacttgaaaaaggctgtcgacgatatgcacccgctgcgcgta
ttgaacctctttaagaaaatatctcccgaagactgcgagctgctagccatgatacctgaa
gacgcgcgaccggagatgttgatctgggaatacatgccagtgccgcccgtggcgttgcga
ccatcagtcatgcaggaaggaggtgcgacggaggacgacgtgaccaacaagatcggagat
atttgccacatcagcagtataatacgcgcgggacttgcacggggctttccgctccagatc
ctaatggaacagtgggatttcctgcagctgcagattgccatgtacatcaacagcgatgcg
ccaggtctcaagcaacagggtctgcaaaaaaccatgcgtggattttcccagcgtctcaag
ggcaaaggcggtcggttccgacaaaatctttctggaaaacgtgtcgatttctctggtcgt
acagtcattggtccagatccaaacttgagcattgatgaagtcgcggtgccagagcgtata
gctaagaatctgacgtatcctgaaaaggttacacgctacaatattgacaagttgcggagg
cttgtcaggaacggctccaacaagtaccccggagccaactacatcctcgatgaccagggt
ccgaacaaagaccgaggcaaaatttcccttattgccctttcgcgattcgataccaaaggc
gaacgcctcgagggcgcctcgaaacgactcaaaattggcgacattgttgaacgccacatc
gaggatggcgacattgtcctcttcaatcgacagccgtctctacacaagctcagtattctg
agtcatcgagcaaaagtgcgaccatggagaacgtttcgactgaatgaatgtgtatgtaat
ccttacaacgccgatttcgacggtgacgagatgaatttacacgttccccaaaccgaagaa
gctcggacagaagctaccgagctcatgggtgtcaaatacaatctggctaccccgaaaaac
ggaacaccaatcattgccgctatccaagatttcattacagctgcgtaccttctaagcaac
aagaataactttttcgaccggcgcaccttttgtcagattgtaaattacatgttcaatggc
gaaggagcattcgatccggacactggcaagaggcacccgattgaaattccacccccggtc
gtatggaagcctcaagcactctggaccggaaagcaggtcttcaatttactgatgcgcccg
tacaaaaagtgcagagtcctagtcaacctcgaagctgcatgcaagcaattcaaaaatacc
cctgatcagcctcccgacctgaacgagaacgatgcctaccttgtcattcgcaactctgag
gtcatgtgtggtgttatggacaaagcaaccgtcggtgacggtaagaaggactctgtcttt
tacgtcatgatgcgagatttcggccccgaccacgctgtccaaggaatgaaccggctctcc
aaactttctgcgcgatggctcagcaataacggtttctcactcggaatcagcgatgtgact
ccaggagaaaaacttaacaagaagaagcaggatcttgtgcaagaagcgtacgccaagtgc
gacaagctgatcaaggacttcaaagaaggaaagctgcagcgcgatccaggttgtgatgaa
gagcaaacaatggagaacaggattggtggtattctgtccggcgttcgtcaagctgctggt
gatatttgtttcgaagagttgagtaggtggaactctcccctactcatggccaagtgcggt
tcaaaaggttccaacatcaacgtctcccagatggttgcttctgtcggacaacagatgatt
ggcggtgcacgtgtagcggatggcttccaccaccgaacattacctcacttccccaaggct
gcacgtcagccagcgtccaagggtttcgtcagtaacagtttcttctccggcctcacccca
tctgagttcattttccacgcgatgagtggtcgtgaaggtctggttgataccgctgtcaag
acggccgagaccggttacatgagtagacgattgatgaagtctcttgaagatctttccgca
cagtacgatgacactgtcaggaactcttctggtactgttgtgcagttccagtacggtgac
gacaaccttgaccccgtggacatggaaggcaaggcaaagcctgtgcattttgaccgaacc
ttctcacatgctgtcacttctacttgggataactcagagtccagtctaacgcctcaggaa
gtccgcgaatacaccgaagcaagactgaacgcccaacgaaacaagtatcctaggtacgca
ctagacggtgtaacgcggctagagtatcgagatcagaccgatagaggaattgaccaaaag
gagtccatgcgtgacttcctcgacacggtacaggattacgtcttcaagaaagcccaaaaa
cttgagacgacgcttgcgtacctcggcattgtgcagcccaatgataggaaggataagaaa
caatcggcagccgatgcggaaaagtacagtcttgctgatggtatcgccaagatctcggag
agagccctcgatactttcatcaccctgtgtttgacaaaatatcatcgctcccgtgtccag
cccggtcatgctgtaggagctatcggagctcagtccattggtgaacccggtacgcaaatg
acgctcaaaactttccattttgctggtgtcgctggtatgtccatcacccaaggtgtaccc
cgtatcaaggaaatcatcaacgcctcttctaccatctccactcctgtcatcgcttgcgag
ctttccaacaagatctccgagtctgcggcgcgaattgtcaaagcacgtgtcgaaaagact
tacctccgcgacgtcatctcgtacgtcgaagacgtttggcaccctaacggtgcctacatt
gccatgcgcattgactgggataccataaacaagcttttcgttgacgtacaaccctacgag
attgctgcggctatcaacgcccacaagcctctcaaatggggcaaagccggcgcaaacgtg
cgcatctcttcctccataatccgcgtcgaagtccctgaccccaacgccgcaaagaagcga
cccgtcaaaacaacacgcaaccacaaagaatactttgagcgcgtccaacaagtcaaatcc
ctcattccggatgtcgtcataaaaggctacccagactgctcccgtgccattatcaaaaaa
gaaagcagccccaacgcccaaggccactacgaatgccaactcctcgtcgaaggctatggc
ctccaagactgcatgaccacccctggaattgaaccttacaatacaaaatccaaccacgtc
atggaagtcaagacagtcctcggcatcgaagccgcccgcgctaccatcgtccgcgaaatc
ggcgacgtaatgggcaacatggacatcgatcctcgtcacatgcagctcctcgccgacgtc
atgacctttaaaggcgaagtcttcggcatcacgcgtttcggtctccaaaagacgcgagat
tccgtcctccaacttgccagtttcgaaaagacgcccgatcaccttttcgaagctgcggcg
cgcggaaagacggatacgattgatggagtcagcgagtgtattattatgggccagagtgtt
aagctgggtaccggtgcgatgcaggttgtcagaccgctgtttttgggtgaggagattggg
gagaagaggacaatgtttgaggaggggtgggaggctttgtga

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