Bipolaris sorokiniana: COCSADRAFT_178650
Help
Entry
COCSADRAFT_178650 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_178650
04131 Membrane trafficking [BR:
bsc04131
]
COCSADRAFT_178650
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
COCSADRAFT_178650
Membrane trafficking [BR:
bsc04131
]
SNARE
SNARE associated proteins
Others
COCSADRAFT_178650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
19133153
NCBI-ProteinID:
XP_007696394
JGI:
Cocsa1_178650
UniProt:
M2RQQ8
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSASHIAANRNSTPEGSSSLRPPQARSSLGANHHLRASADLGGFPSPLANRGIRPASEIY
FGRNNTQSGNPDEMERAAQQWLADIDQYETTLEEMATATLDQDFKDELSAIEQWFRVLSE
AERTAALYALLQQTTQVQIRFFIQVLQQMSKNVPMSGVLSPANFGEKDPMTQKLSDAMSK
LNTGENRHSMGLGRPPPSPGAGKRNSGLETSTINRMFPDAAAAIAKQKAEFTDVVGVAPA
SNRNSTVGDRSSMAAPTISAPEDNKRENNAPPASPWNEGANRPKSSGQQQQQQQPPMGQF
SQPPPSAGLRSPRLPLQNDSNNVQTTTLNALEANSNMPLLSPSYQPGGSWASQLSTPMVA
NFSQSNNQADMVANATAMKLAALSTVNNRIQLDDVRKFRRARSSDNGPISPGMPQMGNGN
ILMTNEMGQVLTPQQAAALQAQQLAAMNGRRSRPSSPGFAMQGQGMGMGAMGSFTSPQAN
GFLAADYGGGMMNNGMGALNLAQFGLGSGGNNDGHGFLGENIDRGRSPRGRRGSSKPPED
PTDPGLLSDIPNWLRSLRLHKYTDNLKDLKWQELIELDDEGLEKRGVNALGARRKMLKVF
EQVKEAQEQGKLR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgagccacatcgccgccaacaggaacagcactcccgagggctcctcctcccta
cgcccgccccaggcccgctcttcgctcggtgcgaaccaccatctccgcgcctcagctgat
ctaggcggcttcccctcgcctttggccaaccgcggcattcgccccgcctccgagatctac
tttggccgcaacaacactcagtctggcaacccagacgagatggagcgtgctgcccaacag
tggcttgccgacattgaccagtatgagactacgctcgaagagatggcgacagccacactc
gatcaggacttcaaggacgagttgagcgccatcgagcagtggtttcgcgttcttagcgag
gcggagaggaccgctgctctctacgccctcctgcagcagacaacccaggttcagattaga
ttctttatccaggttctgcagcaaatgtccaagaacgtgcccatgtctggagtactttca
cctgccaactttggagaaaaggatccaatgacgcagaaactgagcgatgccatgagcaag
ctcaacacgggcgaaaaccgccattccatgggcctcggtcgccccccgccatccccgggt
gctggaaaacgcaactcgggcttggaaacttccaccatcaaccgcatgttcccagatgcg
gccgcagctattgctaagcagaaggctgaattcaccgatgttgtaggcgttgcaccggcg
tcaaaccgcaacagcactgtcggcgaccgcagctcaatggcagctcccaccatctctgcc
cctgaggacaacaaaagggagaacaatgccccgccggcatctccctggaatgaaggcgca
aaccgtccaaagtcctctggccagcagcagcaacagcagcaaccgcccatgggccagttt
tcgcagccccctccatctgccggtcttcgatcccctcgtcttcccctccagaatgatagc
aataatgtgcagactactactctgaatgctctcgaggcaaactccaacatgccactcctt
tcgccttcttaccagccaggtggcagctgggcgtcgcagctgagcacccccatggtcgcc
aactttagccagtccaacaaccaagccgatatggttgccaatgccacagctatgaagctt
gctgcactctctactgttaacaaccgtattcagttggacgatgtgcgcaagttccgtcgc
gctcgctcatcagacaacggtcctatatcgcctggtatgcctcaaatgggcaatggaaac
attctcatgacaaacgagatgggccaggtcttgactccccagcaagcggctgctctgcag
gcccaacagttggctgccatgaacggccgtcgatctcgacccagctctcctgggttcgca
atgcagggccagggtatgggtatgggcgccatgggtagcttcacgtctccccaggccaat
ggtttcctagctgctgactatggaggtggaatgatgaacaacggcatgggtgcacttaac
cttgctcagtttggattgggtagcggaggcaacaatgacggccacggcttcctcggtgaa
aacattgaccgtggtcgatctccccgaggtcgccgcggcagctccaagcccccggaagac
cctaccgaccctggtctactctcggatattcccaactggctccggagtctccggttgcac
aagtacacggataacctcaaagacctcaaatggcaggagctcattgagcttgacgacgaa
ggtttggagaagcgcggagttaacgctcttggcgcgcgtaggaagatgttgaaggttttc
gagcaggtgaaagaagctcaggaacagggcaaattgcgatag
DBGET
integrated database retrieval system
