Bipolaris sorokiniana: COCSADRAFT_183449
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Entry
COCSADRAFT_183449 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_183449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_183449
Spliceosome [BR:
bsc03041
]
Complex A
U1 snRNP components
U1 related factors
COCSADRAFT_183449
Complex B
COCSADRAFT_183449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WW_2
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
19133415
NCBI-ProteinID:
XP_007702765
JGI:
Cocsa1_183449
UniProt:
M2R2E6
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MNGYPPPMAPPGSTWTSTKTPDGREYYYNTTTKLTTWEKPDELKDDVERALPGTGWAAHW
ADGKRYFAHIETKQTTWTVPDVVQQKIDQMRQSLPPQRPPPVGPSSWAGGPPSNAPSYEN
RRPERDEYRPDRHDRRDDRDRDRESGFAGDRPNISFTAGTELQFSTPHEAEAAFIKVLKQ
IKVQPDWSWQQAVRAGIHDPNWRAIPEPEKREEAFRKYCEDLRAQEKLKEQDRQAKLRSD
FTAMLRSHPEIKYYTRWKTALPIIEDETIFRSAKDDNERRTLFEEYIISLKKAHEEEEEA
SRESALDQVMGLLQALDLEPFTRWHTAEEKLERNEEFKSEKFKTLTRLDVLDQFEKHIRQ
LQREHNDRVQAERRIKRRVERKNRDAFIELLGELRHKGALRAGSKWKNIHELVQEDARYT
AMLGQSGSSPLDLFRDALEEEESKFRTLRRRALDVLEQQRFEVTTSTPVEEFLTVMRKDP
RTADIDEQSMHSIYNYVLNKVKKREEEERRDEESNERYAVDKLRSVIKHLDPPVSVSDDW
EVVRPRVEKTDEYRALKSDTLRESAFDKYISRLKDKENDRRDRSRRDDRDRDRDRRDRDR
EYRSGHSDSHRHHRTRTRSPEHDPYAAERRRAVQDREARYRNSDSTGLSPLPRRDRRDDD
RYERSRRGSIGDHYGRERREREVERERSYVSRADPREATVSLLDYGDSGGRTSSTRRRRD
SEESSSRRDRETKRARYSPRGADRKSKTPAPEPSSKKEEEDRALRSGSEEGEIEED
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatatccgcctccaatggcgccgcctggctccacttggacaagtactaaaact
ccagatggcagggaatactactacaacacgaccacgaagctcaccacgtgggagaagccc
gacgagctgaaagatgatgttgagcgcgcactccctggcaccggctgggcagcccactgg
gcagatggcaagcgatactttgcgcatattgagaccaagcagacaacgtggactgttccc
gatgttgttcagcagaaaatcgaccagatgaggcagagcctgccgcctcagcgacctccc
ccagttggtccctctagctgggcggggggtccaccctcgaatgcgccgtcgtacgagaac
agacgccccgaacgcgacgagtaccgtcctgaccgccatgaccgtcgcgacgatagagac
cgggatcgcgagtctggcttcgccggcgatcgacccaacattagtttcacggcaggaacc
gagcttcagttttccacgccccacgaggccgaggctgctttcatcaaggtgctcaaacag
atcaaggttcagcctgactggtcgtggcagcaggctgtgcgtgctggtattcatgatcct
aactggcgcgccataccagagcctgagaagcgcgaggaggccttccggaaatattgcgaa
gatttgcgcgcccaggaaaagctcaaggagcaggatcgccaggccaaactacgctctgat
ttcactgctatgctgcgttcgcacccagagatcaaatactacacccgctggaagactgct
cttcccattatcgaagacgagaccattttccgctctgccaaggacgacaatgagcgaagg
accctgttcgaggaatacatcatctctctcaaaaaggcgcatgaggaagaagaggaagcg
agcagagaatccgcactcgaccaagtcatgggtctgctacaggcactggatctggagcct
tttactcgctggcacacggctgaggaaaagctggagcgcaacgaggagttcaagagtgaa
aagttcaagactttgactcgcctagatgtcctcgatcagtttgagaagcatatcaggcag
ctccagcgcgagcacaacgatcgagttcaggccgagcgacgcatcaagcgccgtgtcgag
cgcaagaaccgcgatgcgttcatagagctacttggtgaactcaggcacaaaggcgcgtta
cgtgctggcagcaaatggaaaaatattcatgagctggtccaagaggatgcccgttacacg
gctatgcttggacaaagcggatcgtctcctcttgatctgttccgcgatgctctcgaagaa
gaagagagcaaattccgtaccctccgccgacgggccttggatgtactagagcaacaacga
ttcgaggttaccacatcgactcctgtggaagaattcctaactgtcatgcgaaaagatcct
cgcacagctgatattgacgaacagtccatgcacagtatctacaactacgtcctcaacaaa
gtgaagaaacgcgaggaagaagaacgacgagacgaggagtccaacgagcgctacgccgta
gacaagcttcgctctgttatcaagcaccttgatccaccagtgtcagtatcagatgactgg
gaagtggtacgtccccgtgttgagaagacagacgaataccgcgcactgaaatcagataca
ctacgcgaatcggcgttcgataagtacatctcccgattgaaggacaaggagaatgatcgt
cgggataggagcaggcgcgatgatcgcgaccgtgacagggatagacgtgatcgagatcgt
gagtatcgcagcggacattctgactctcaccgccatcatcgtacacgcactcgctcacct
gaacatgacccttacgctgcagagcgtcgacgagcagtgcaagatagggaggcgcgctac
agaaacagcgacagcacgggcctgtctcctcttccgcgtcgcgaccgccgagatgatgat
cgatatgagcgctctcgtcgaggctctattggagatcattatggtcgtgagcgccgcgag
cgtgaagtggagcgtgaacgatcttacgttagtagagccgaccctcgtgaggcgactgtt
agtctgctcgactacggggacagcggtggccgcacttcctcgaccagacgccgtcgcgac
agcgaagaaagttctagtaggcgcgatcgagagaccaagcgtgcacgctactctccccgt
ggtgcggaccgcaagtccaagacccccgcccctgaaccgtcgtccaagaaggaagaagaa
gatcgcgctctccgtagtggaagcgaggaaggcgagattgaggaagattag
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