Bipolaris sorokiniana: COCSADRAFT_186740
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Entry
COCSADRAFT_186740 CDS
T03124
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COCSADRAFT_186740
Enzymes [BR:
bsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
COCSADRAFT_186740
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Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
BDI_1685-like_C
Motif
Other DBs
NCBI-GeneID:
19133575
NCBI-ProteinID:
XP_007695137
JGI:
Cocsa1_186740
UniProt:
M2TLE9
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MRCLAALTTLLLAPTAVFAAWGYTDDGKNYVIDTNANLVVKVSKSNADLTSIKYRGIEYN
GQNGKNSHVESGLAPGTVTIKQYTSPANIIKVTMKVGTLIHTLVFRYGNPNVYIFMNKRD
TSITVSRYIVRIPANIFKNNVNEDTDWVPNGAPAIESGDINGVNGQTWSKHYSGKKYGRT
MDYDYVGYTNNNVGMYLIRSNHEKASGGPFFRSLIRRGGDGGPDLYDIYQYNMGHTDPMR
LGLQGPSVLHFTDNGAAPNHNLFARNANWDWFDALEIEGWVPASRRGAVAGVGLANMKSG
FQYVVGLKNDQAQYWTIATGAWRIGNALPGTYTLTVYKGELEVHTSTITIAAGSTATRNT
ITLVDPNDTPAIWRIGDWDGTPRGLLNFQDTPMKPTYMHPSDSRLANWKVGNFIIGTTPI
SGFPAYIWKDVNNDYLVYFRLTDAQLARPAKIRIGVTQGQAGGRPTVAVNAWVAKLPADK
GQGDTRSLTVGTYRGNNYVYEFEVPASAWVASAREYQILKITVISGKTAAGYLSPAVSFD
AIDLIGL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtctcgccgccctcacgacgctgcttcttgccccgactgctgtctttgcagct
tggggctacacggatgatgggaagaactatgtcattgacaccaacgctaatctggtggtc
aaagtcagcaaatccaacgccgacttgacttcgatcaagtaccgcggcatcgagtacaat
ggtcagaatggaaagaactcgcatgtcgagtctgggcttgcacccggcactgttactatc
aagcagtacacttctccagccaacatcatcaaagtcaccatgaaagttggaactcttatc
catacgctcgtcttccgctatggcaacccgaacgtgtatattttcatgaacaagagggac
acgagcatcaccgtgtcacgttatatcgtccgcatccctgcaaatatcttcaagaacaat
gtcaacgaagatactgactgggttcccaacggtgcaccggctatcgagtctggcgatatc
aacggcgtcaatggtcagacatggtcgaagcattactctggaaagaaatatggtcgcacg
atggactacgactatgtcggctacaccaacaataacgtcggcatgtacttgattcgctcg
aaccacgagaaagcgtccggaggtcctttcttcagaagtctgatacgtcgcggcggtgat
ggcggaccagatctctacgacatttatcagtacaacatgggccacaccgaccccatgcga
ctcggtctgcaaggcccttcagtactccacttcaccgacaacggcgcagcacccaaccac
aacctctttgcccgtaacgccaactgggactggttcgacgcactcgaaatcgaaggctgg
gttcccgccagccgccgcggagccgtagccggcgtcggtctcgccaacatgaagagcggc
ttccagtacgtcgtgggcctcaaaaatgaccaagcccaatactggactatcgccaccggc
gcctggcgcatcggaaacgccctgcctggcacttacactctgactgtctacaaaggcgaa
ctcgaagtccacaccagcaccatcaccatcgccgccggctccaccgcaacccgcaacaca
atcacccttgtcgaccccaacgacacccccgccatctggcgcatcggcgactgggacggc
actccccgcggcctcctcaacttccaagacacccccatgaaaccaacctacatgcacccg
tccgactcgcgcctcgcaaactggaaagttggaaatttcatcatcgggacgaccccaatt
tccggattcccggcatatatctggaaagatgtcaacaatgactacctcgtgtatttccgt
cttaccgacgcacagctcgcccggcctgcgaagatcaggatcggagtgacgcaaggacag
gcggggggacgcccgactgttgcggtgaatgcgtgggttgccaagctaccggctgacaaa
gggcaaggggatacgaggagtttgacggtggggacttatagaggaaataactacgtgtat
gagtttgaggttccggctagtgcgtgggtggcgagtgcgagggagtatcagattctcaag
attacggtgatttcgggcaagacggcggcggggtatttgagtccggcggtgagctttgat
gctattgatttgattgggttataa
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