Bipolaris sorokiniana: COCSADRAFT_188997
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Entry
COCSADRAFT_188997 CDS
T03124
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COCSADRAFT_188997
Enzymes [BR:
bsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
COCSADRAFT_188997
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Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
GETHR
Motif
Other DBs
NCBI-GeneID:
19133654
NCBI-ProteinID:
XP_007698131
JGI:
Cocsa1_188997
UniProt:
M2SHM2
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MKSLLPLLCGGAGVVASASAYSQHPSVPQQPKSFFRQIGNATWILGNELWNVTQNAQYAD
KLMFKGKDRVGEAVGHYVSYNGAASDLRWTTASIASSGPNWLDIRFSAAEGDFHWVLHDD
LAGAYQYFINRALPTLGEFRTLWRLSNSSFPNAFTNVKSGPLPPFSSYQNATNVQDETWQ
KSDGTFLTKYDWAAFLREQTVYGVWGEEVGSWYLHPGKEYLNGDQLKQELMLHRESKTGD
TVQLNMLHGTHYQASSRDSFAVGDDARVWGPWLWYLNDGSRQDAAARWEREKKEWPYAWF
KNAAYQSRGAVQGKLLLSDGRPAAGAAVFLGDNRNETVSTLDQGQNYYYTTYADDTGSFR
IRDVRSGMYALYAWGNGRPIADVITNFTHNDVEIRKGKTTKLPSLTWPVTNKTKRIFQIG
DFDRKTDGFYLADATIPVQHARIDKCPANLTYTVGTSTPSIDWCFGQSKLGTWSVSFLAS
SDNSTAARLVVSLAGFSQGSSADILVNEAKIGNITSASLANSQDTYRGATRAGEWRRLEF
GVPRGLLKEGQNKLDVRVTKSTQWRGWLWDSLVLEAV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctctcctgcctcttctctgcggtggcgcaggcgtagtagcatcagcatccgca
tactcgcaacaccccagcgttccccaacaacccaaaagcttcttccgccaaatcggaaat
gcaacatggatcctaggaaacgagctctggaacgtgacgcaaaacgcacagtatgcggat
aaattaatgtttaaaggaaaggatcgtgtgggtgaggcggtgggacattatgttagttac
aatggcgcagcatccgaccttcgctggaccaccgcttccatcgcatcatccggccctaac
tggctcgacatacgcttcagcgctgcggaaggcgatttccactgggtgctccacgacgac
ctcgctggcgcatatcaatacttcatcaaccgcgcgctacccacgcttggtgaattccgc
accctatggcgcctctccaacagctccttccccaacgccttcacaaacgtgaaaagcggg
ccactcccaccgttctcctcgtaccaaaacgctacgaatgtgcaagacgagacgtggcag
aagagcgatggcactttcttgaccaaatacgactgggctgcttttttgcgcgagcagacg
gtgtatggggtttggggcgaggaggtggggagttggtatttgcatcccggcaaggagtat
ttgaatggggatcagttgaagcaggagttgatgctgcatcgtgagtccaagacgggggat
acagtgcagttgaatatgctgcatgggacgcattatcaagcctcatcccgcgattctttt
gcggtgggtgatgatgctagggtttgggggccttggctgtggtatttaaatgatgggagt
aggcaggatgctgctgcacggtgggaaagggaaaagaaagagtggccatatgcgtggttc
aagaatgcagcgtatcagtctcgaggcgcggttcaaggaaagctgctgctgagtgatgga
cggcctgcggctggtgcagcagtgtttctaggtgacaatcgcaacgagacggtgtcgacg
ctggatcagggacagaattattactacacgacctacgcggatgatacgggctcgttccgt
atacgcgacgtccggtctggcatgtatgccttgtatgcgtggggaaacggcaggccgatt
gcagatgtcataacgaactttacgcacaacgatgttgaaatcagaaagggaaagacaaca
aagttaccctcacttacctggcccgttacgaacaagacaaaacgcatctttcaaattggg
gatttcgaccgcaaaacagatgggttttatctggcagacgcgacgattccagtccaacac
gctcgcatagataaatgtcccgccaatctgacgtatactgttggtaccagcacgccatcg
atagattggtgctttggccaatctaaactggggacttggtcggtttcctttctggcctca
tctgacaatagtaccgctgctagacttgtcgtgtctcttgccggcttttcccaaggatcc
agcgctgacattctggtcaacgaggctaaaatcgggaatatcaccagtgccagcttggct
aatagccaggatacgtatcgtggtgctacgagagccggggagtggagacgcttagagttt
ggagttccgcggggccttctcaaagaagggcagaataagctagacgtcagggttactaaa
agcacgcagtggagaggatggctgtgggatagtctggttttggaagctgtgtag
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