Bipolaris sorokiniana: COCSADRAFT_189966
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Entry
COCSADRAFT_189966 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_189966
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
90S particles
Other 90S particles
COCSADRAFT_189966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_PRP39_C
HAT_PRP39_N
Suf
RNase_II_C_S1
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
PPR
UTP6_C
TPR_CcmH_CycH
Mad3_BUB1_I
PPR_2
Motif
Other DBs
NCBI-GeneID:
19133701
NCBI-ProteinID:
XP_007699497
JGI:
Cocsa1_189966
UniProt:
M2T7N9
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MGAVKRKAEQGATPSKKPKGASGDRSAKRRKSDVDQQSPAKAKLENPAPPTSIFKDEEKK
SFPRGGASVLTPLEHKQIQIKANQDVLFEQSGQKRPGGDDGEGYSDMGSEDDEKKSAPKS
KKKMTKKSKKTHESGDKEDVVKVETLSYKKLSPGTIVLGQITDISHQDLVLALPNNLVGY
VPLTAVSDKLNERLEKLLKEDESDKEDGSDKDDFEDADLRDLFSVGQYLRACITATSGEG
AKARKRLELSIEPKLVNTGLTKRKIPVNGMIQASVVSNEDHGLVMDLGLNDATLKGFLPK
GELGPNLLHSKVQEGAVFMCLITGLNSDGRIVKLSADHTKAGNLTKGNTLTEAPTIDVFL
PGTAVDLLVTENTPNTITGKILGLIDATADAYHSGATEKATDVSQKHKIGSKVKARVLFT
CPGSDPRKVSVSLLDHVLSLSTRMSGKPKERKPPIDLLPISTIVESAKVVKVAPSQGAFF
DLGIKDVVGFAHISRLSDDKVDILSEEAGAFKLDSKHKARIVGYNALDGLFQLSLEKKVI
DQPFLRIEDIKAGEVVKGKVHKLFADKTGATAVLVHLSDGITGLVPEMHLADVRLQHPER
KFREGLPVTVRVLYTEPARHQIHLTLKKSLVNSEVKPWTNYKMISEGATGPGILVNVRRN
GATVQFYNRVRAWLPVAEMSEAFIHDATRHFHVGQVVNVRVLSVDAKERQLLVSCKDPSA
VDTNKEAAFNALNPGGIVKGTVVEKSDESATLDIGNGVKGILRLGHLTDGSEKKDISTMK
KIRVGGTLEDLVVLAKHGKSKTATVSNKPSLRKDAQASKLAISIEDLQAGETVHGFVRGI
LSDKVFVELGNGISGALFKSQLPEDMAAAPDFGLRKDQSITARVTHVDVGKGLFWLSMKS
EAEAASTKAAAAPPVKVAEPLVDPVDPNMTSTDDIKFGTLMTVRVRSVKDTQLNVELAAN
VPGRISVSELFENWDSIPDKKRPTAHFKMNDTIQARVLGRHDPRNFRFLPITSRSSNKTT
TYEMTAKTEEIKSEADVLSLDKVITGSSYIAFINNIADRHVWVNISANIRGRIDFFDLTD
DLEKLSDVEKNFPVGSALKVRVKTVDAANGKLDLTAASTVTGKSLSLQDLKVGHVLPARV
TKLHDASIVVQINESIAAPIFMEQLADDYDKAQPKNFVAGDVLRVCVIDIDIPNKKLGLS
ARPSRVLSSSLPVKDPEITDRTQLKVNQVVRGFVKHIANNGVYVRLGPHVEAYVRVSHLS
DEYIKDWKSVFHVDQLVTGKVISNKEDQRNPQLSLKTSIIKTDYVEPLEFATLKIGQIVS
AKVRHVEDYGVFLIVDNSNNVSGLCHISQIADAVVDKEKLKDMYKKDDVVKAKVIKVDPK
SRKVSFTLKYSQVKGEGKGEDEEMEDVSDVEQSEDDDSEGGVKLDNDVDMRSVKSAESDD
DIELADADSSEDESENDESKATAKSLSTSGFDWTGATLDFDQQKGGAESESEDDAPKKKK
KSKKATIKEDRTGDLDAYGPQSVADYERLLLGQPNSAELWVRYMVFQRELNEIEKARQIA
RRALVTINPREEKEKLDVWTALLHLENDFSSDDAINAVFKEACQNNDDREIHERMIKIYI
SSGKIDKADELYQSMMKNKSFTADPKFWLSYAAFLMDVIQPPSPARARALLQRATQSVAA
PQHRYLTQKFAALEFKSPNGDTERGRTIFEGLVDTFAKKGDVWDMYLMLEQSHGESDKVR
DLFERMTKVGKSSRIRGVFKKWAEWENSVRNKKGVEKVKKLEEAWREMKAEKDNE
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggtcaagcggaaagcagagcagggcgccaccccgtccaaaaagcccaagggc
gcatccggcgaccgatcagcgaagcggcgcaagtccgatgtcgaccagcaatcgcctgca
aaggcgaagcttgagaaccctgcaccgccaaccagcattttcaaggatgaagagaagaag
tcgtttcccagaggaggcgccagtgtcttgaccccactcgaacacaagcaaatccagatc
aaggcgaaccaggatgttcttttcgagcaatctgggcagaagcgtcccggcggcgatgat
ggcgaaggatatagcgacatgggttccgaggacgatgagaaaaagtctgcgcctaagtca
aagaagaagatgactaagaagagcaaaaagacacacgagagcggcgacaaggaggatgta
gtaaaggtcgagactcttagctacaagaaactgtcgcctggaactattgtacttggtcag
atcaccgacatttcccaccaagaccttgtgcttgccctccccaacaatctagtcggctac
gtccccctcactgccgtgtccgacaaactcaatgagaggctagagaagctccttaaggaa
gatgagagtgacaaggaagatggaagcgacaaggatgactttgaggatgctgatctcagg
gacctcttctccgtgggccagtaccttcgtgcatgcatcaccgcaaccagcggcgaaggc
gcaaaagcaaggaagcgactcgaactttcaattgagcctaagctggtcaacacgggcctt
accaaacgcaaaatacccgtcaatggcatgatacaagcgtctgtcgtgagcaacgaggac
catggcctggtcatggatctgggcttgaacgatgccacattaaagggctttttaccaaag
ggcgagcttggtccaaacctactgcattcaaaggtccaagagggtgccgtctttatgtgc
ttgattaccgggctcaattctgacgggcgcatcgtcaagctctctgccgaccacaccaag
gcaggaaacctgaccaagggtaataccttgacagaagcacctaccattgacgtgttcctc
ccgggaactgcggtcgaccttctcgttacagaaaacacgccaaacacaatcacgggcaag
atcctgggcttgatagatgcgacggctgacgcataccactccggcgcgactgagaaggcc
accgacgtgtctcaaaagcacaagatcggatccaaagtaaaggcccgtgttttgttcaca
tgtcctggctcagatcccaggaaggtcagcgtgtctttactagaccatgtgctttcgttg
tctacgcgcatgtctggaaaacccaaggagcgcaaacctcctatcgacttactgccaatt
tctaccattgttgaaagcgcaaaggttgtcaaggtggcaccaagccaaggtgcattcttc
gaccttggaatcaaagatgttgtcggcttcgcccacatatcgcgactctcagacgacaaa
gtcgatattctctcagaggaggctggtgcattcaagcttgactcgaagcacaaggcaaga
attgttggttacaacgctcttgacggacttttccagctgtcccttgagaagaaggtcatt
gaccaaccctttctccgtattgaggacatcaaagctggtgaagttgtcaagggcaaagtg
cataagcttttcgcggacaagactggagcaactgctgttcttgtccatctgtctgatggc
attactggtctggttccagagatgcatctggctgatgtccggttacaacacccagagcgc
aagtttagagaaggactgccggtcacagttcgagtgctttacaccgagcccgcgagacat
caaatacaccttaccctcaagaagtctttggttaactccgaggtgaagccttggacaaac
tacaagatgatttcagaaggtgctaccggccctggaatcttggtcaacgtccgccgcaat
ggtgccactgtgcaattttacaatcgtgtaagggcatggcttccagttgcggagatgagt
gaagcattcattcatgatgcaacacgacacttccatgttgggcaggttgtcaacgtgcgt
gttctctccgttgatgcaaaagaacgtcagctcttggtgtcctgcaaggatccttctgct
gttgataccaacaaggaagctgcctttaatgctctcaacccgggtggaatcgtcaaggga
acggtcgttgaaaagtctgacgaatcagctactctggacattggcaacggtgtcaagggc
attcttcgccttggtcatctgactgacggatcagagaagaaagacatctcgaccatgaag
aagattcgcgttggtggaactttggaagatctcgtggttctcgccaagcatggcaaatcc
aaaacggcgaccgtatccaacaaacctagtcttcgaaaagacgcacaggcctcaaaactt
gccatcagtattgaggatctgcaagcgggtgagactgtgcatggattcgtgcgcggtatc
ctctcagacaaggtctttgtcgagctcggcaatggcatcagcggtgcactgttcaaatcg
cagttaccagaagacatggccgcggcgcccgactttggcctccgcaaggaccaatccatc
actgcccgagttacgcatgtagatgttggaaaggggctcttttggctatcgatgaaatct
gaagctgaagctgcttcaacaaaggctgctgctgcccctccagtaaaggtagcagagcct
ctggttgatccagtggaccctaacatgacatctaccgacgacatcaagtttggtactctg
atgaccgtccgtgtccggtcagtcaaggacacacaactcaacgttgagcttgccgcaaat
gttcccggtcgcatttctgtatcggaactgtttgaaaactgggatagcattcccgacaag
aagcgaccaactgcacacttcaagatgaacgatacgattcaggctcgggttttgggaagg
cacgatcctcgcaatttccgtttcctcccgatcacatctcggtcaagcaataagacgaca
acatacgaaatgactgcaaagacggaggagatcaagtcagaagcggatgtgttgagcctc
gacaaagttataaccggctcgtcttacatcgctttcatcaacaacattgccgaccgccat
gtctgggtgaacatctcagccaatatccgcgggcgcatcgacttcttcgacctgactgac
gatcttgagaagctatctgatgtcgagaagaactttcctgtgggttctgctctcaaggtc
cgcgtaaagacagtggatgctgcgaatggaaaactagacttgacagctgcatctacagtg
accggaaaatcactgtctctccaagacctgaaagtcggtcacgtcctacctgcacgtgtg
accaagctgcatgatgcatcaattgttgtccaaatcaacgaaagcatcgctgcacccatc
ttcatggagcagttggcagatgactacgacaaagctcagccgaagaactttgtagctggc
gatgtcttgcgagtgtgcgttattgacattgacattccaaacaagaaactaggattgtcg
gccagaccttccagggtcctgagctcttcattgccagtcaaggatcccgagatcaccgac
cgtacacagctcaaagtgaaccaagtcgtccgtggcttcgtcaagcacattgcaaacaac
ggtgtctacgtccgtctaggtccacatgttgaagcctacgtccgcgtcagtcatctttcg
gacgagtatattaaagactggaagagtgtattccatgtggatcagctcgtgaccggcaag
gtcatctcgaacaaggaagatcaacgtaacccacagctgagtttgaagacttcaatcatt
aagacagactacgtcgagcccttggaatttgctactctaaagattggccaaatcgtcagt
gccaaggtcaggcatgtggaggactatggtgtcttcctcattgtcgacaactcgaacaat
gtcagcggtctttgccacatctctcaaatagcagatgctgtcgttgacaaggagaagctc
aaggacatgtacaagaaggatgatgttgtcaaggctaaagtcatcaaggttgaccccaag
tcgaggaaggtcagctttacgttgaagtattcacaggtgaaaggtgaaggcaaaggcgaa
gatgaggagatggaggacgtctcggatgtcgagcaatcggaggatgacgattcggaggga
ggagttaagctcgacaacgatgttgatatgaggagcgttaagagcgcagaaagcgatgat
gatatcgagcttgccgatgcagacagctccgaagacgagtctgaaaacgacgagtcaaag
gcaactgcaaagagcctcagcacttctggcttcgactggacgggtgccaccctcgacttt
gatcagcaaaagggcggggctgaatccgagtccgaggatgatgctccaaaaaagaaaaag
aagagcaagaaggccaccatcaaggaggatcgcactggtgaccttgatgcctatggccct
cagtctgtcgcagattatgagcgcttactccttggacagcctaacagcgccgagctgtgg
gtacgctatatggtgttccagcgcgagctcaatgagattgagaaggcgcgccagattgcc
cgtcgtgcactggtcaccatcaatccgcgagaggagaaggagaagcttgacgtctggact
gccttgctgcacttggaaaatgacttctccagtgacgacgcaatcaacgccgtcttcaag
gaggcatgccaaaacaatgatgaccgcgaaatccacgagcgcatgatcaagatttacatt
tcatcgggcaagattgacaaagcagatgagctttatcagtccatgatgaagaacaagtcg
ttcacagccgacccgaagttctggctttcctacgccgcatttcttatggacgttatccag
ccaccctccccagctcgagcccgcgcccttctccaacgtgccacacaatctgttgcagcc
cctcaacaccggtatcttactcaaaagtttgccgcactagaattcaagtcgcccaatggc
gataccgagcgcggccgcaccatcttcgagggtctcgtcgacacttttgccaagaaggga
gatgtatgggacatgtatctgatgcttgagcagagccacggcgagtctgacaaggtccgg
gatttgttcgagaggatgactaaggtgggcaagtcgtcgaggatcaggggcgtgttcaag
aaatgggcagaatgggaaaatagcgtgaggaacaagaagggcgttgagaaggtgaagaaa
ctggaggaggcatggagggagatgaaggcggagaaggataacgagtaa
DBGET
integrated database retrieval system
