Bipolaris sorokiniana: COCSADRAFT_190282
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Entry
COCSADRAFT_190282 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bsc04131
]
COCSADRAFT_190282
Membrane trafficking [BR:
bsc04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
COCSADRAFT_190282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
eIF2A
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
zf-RING_16
WDR54
Beta-prop_IFT140_1st
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
19133714
NCBI-ProteinID:
XP_007699990
JGI:
Cocsa1_190282
UniProt:
M2S9Y6
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MSSPKIPPAPPLPLPKRPRSYFERFVAQPLTTAYSSRPPSVQPDGARLPNPLVPKVPGVR
TGYSQHASHKTGLDISALDINRERTHAVLAGKELLKTVRVQDARIVDETNLRAAVLNYAD
SHARQREGLGIHDVKWSHGQFSSHIATAAANGKVILYDLNRASVELTRLHEHTRQVHKLA
FNPHQGHLLLSASHDSTVRLWDLRDMRRDATICPSRDQYHGMNGGIRDVQWSPTDAVEFA
FGTDNGTIQRWDFRYTKSPKQKITAHDQRICTSIDWHPDGKHLLSAGVDRTVKVWDFSIT
GRRQKAAHVLHTPFPIYKARWRPPSWSSNDHDDKGVYQCTQIATSYDREHPAIHVWDFRR
PFLPFRDISCFSTAPSDMLWHSRDTLWTVGKEGIFQQNDVHHAPKTIDRRNLQAFAISPT
GEIGAVAQKRSHPRSSAGLAYVDDAYLGETRDRHHSSAKASLRNSADDSLDDSFLASAMK
RHHVRAASNRSTKSFSTTPPSDVGPKVMLLSDSMVMHSDSHKPNQTAIRGHLPGTTNTQI
FAYLAQKYKNIALPDPPDLDSFLRVERVFEQNAEYAQRAAMYRLAQSWRIMGASIAVATR
RRAELHRQQRRLHPHIPALRLSNKMLEPSSAPMEAHDKRLAAAASVNPAVRAILGTLEKP
APPPRPPTTTIESTSNISTPLARPVRTGFGNDTKRPDLLDIDKEDMVQLPPAVTATPTQT
SSALAPPHKTFSSPQWYHSGDGLDERRALSGSYRASPRIPLSLTPSSVQGMNINAPRSIE
RHDSGESFTMFSASSDSQKGNSMPSSFASGNSQSNREKLSSEDWDAVPEHSSFGKPRNSK
DEDLGKSVPISPTTIPIGGNGSLNRQHTEGPASKGTNHDADQPDNGETAVRDMENLRRNN
QLLRQDSSDSEALTSIYSSSYDYNIDMEASGTIVPDVDDMRSPHAPKPPPNLPHASGSAP
PVMDPTTEDGLLLSDFTAMHVDAEAASPYSVIGLLNSILAYHTKASDAQFPSILLLLLQS
LLPQTQSPTDDPGTNVGDVLNAFADTFVALGLSPAQAKAILSTQLSQLIATGINPYQAES
ILHTYHSQLHSLSLFNSAAMLRRLAYPAYPAVYEQALKETQLGLLCLSCKSPINNPKDKM
RCESCKRTQAPCPICWAKYPAFEPLTAKKAKSKFRSNLKDRGHKRQRSSLTSGQNLGDDR
DAVGPSPSVPTEWSAPTATLWTWCPLCGHGGHANCLSTWFADPVLSEGACPTEGCLCDCV
QGTRRDAKIEEMLLKKAEKDRSKLVRKGDDWKVKESKAVSAVRNAALDTIPAHPQHSGSG
TTTPTRR
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcccaagataccgcctgcgccgccgctgcctctgcccaagaggccgcgctcg
tactttgagcgcttcgtcgcccagccgctgacgacggcctactcgtcgcggcccccaagc
gtgcagcccgacggcgcccggctgccgaaccctttggtgccgaaagttcccggtgtccgc
acaggctattcgcagcatgcaagccacaagacgggcctcgacatctcggccctcgacatc
aaccgcgagcgcacccatgccgtcctcgccggcaaggagctgctcaagacggtccgcgtc
caagatgcccgcatcgtcgacgagactaatctgcgtgctgctgtcctcaactatgcagac
tcgcacgcccgccagcgcgagggcttgggcatccacgatgtcaagtggtcccacggccag
ttcagctcgcatatagccacggctgctgcaaatggcaaggtcatcctctacgacctcaac
cgtgccagcgtagagcttacccgcctgcatgagcacacccgtcaggtacacaagcttgca
ttcaacccccaccaggggcacctgttactctccgcaagccatgactccaccgtccgcctg
tgggacttgcgcgacatgcgcagggacgccaccatctgtcccagcagagaccagtaccat
ggcatgaatggcggcatccgtgatgtccaatggtccccgacggacgctgtagaattcgcc
tttggcacagacaacggcaccatccagcgctgggactttcgctataccaagagccccaag
cagaaaatcactgcccacgaccagcgcatctgcacctccatcgactggcatccagacggt
aagcatctcctcagcgccggcgtcgaccgcaccgtcaaggtctgggacttctccattact
ggccgccgccagaaagccgcccatgttctgcacacaccctttcccatctacaaggcgcgc
tggcgcccaccatcttggtcgtccaatgaccacgacgacaaaggcgtctatcagtgcaca
caaattgccacatcatatgaccgcgaacatccagccatccatgtctgggactttcgccgc
cccttcttgccctttcgggacatcagttgtttctccactgccccatctgatatgctttgg
cactcgcgtgacacactatggactgttggcaaagaaggcatcttccagcaaaatgatgtc
caccatgccccaaaaactattgatcgtcgcaacctgcaggcctttgccatatcacctacc
ggcgagattggcgcagtcgcccagaagaggtcacacccgcgctcctctgcgggtctagcc
tacgtggatgacgcctaccttggcgaaacccgtgatagacatcatagctctgcaaaggca
agtcttcgaaactcagcagatgatagcctggatgacagctttcttgcctctgccatgaag
cgtcatcatgtgcgcgctgctagtaacaggtcgaccaagtcatttagtacaactccacct
tctgacgttggcccaaaggtcatgctcttgagtgactcgatggttatgcacagcgattcc
cacaagccaaatcagactgccattcgaggtcacttgcctggtacaaccaatacccagatc
tttgcctatctggctcaaaaatacaaaaacatagccctgcctgaccctcccgatctcgac
tcttttctgcgagtggaaagagtctttgagcagaatgccgaatatgcacagcgtgcagca
atgtaccggctcgctcagtcgtggaggatcatgggagcatccattgccgtagcgacacgg
cgccgagcagagttacatagacagcaaagaaggttgcacccgcatattcccgcgctgcgg
ctatccaacaaaatgctcgagccgtcgtctgcgcccatggaagcccatgacaagcgactg
gcagcggcagcgtccgtaaatcctgccgtgcgcgctattctcggtaccttggagaaacca
gcaccgccacccagaccacccaccacgacaatagagagcacctccaatatatcaacacct
cttgctcgtccagtgaggaccggcttcggtaatgacacaaaaaggcctgaccttcttgac
attgataaagaggacatggttcaactaccaccagcagtcactgcaacgcctactcagaca
agtagtgcacttgcgcctccacataaaacgttcagcagcccccagtggtaccactcaggt
gatggccttgacgagcgtcgcgccttgagtggcagctacagagcatcgcctcgaattcct
ctaagtctcacgccaagcagcgtgcaaggtatgaacatcaatgcacctcgttcaatagag
cggcatgactctggagaaagttttaccatgttctcggcctcttcggattcccaaaaggga
aactcaatgcctagttcatttgcaagcggtaactcacaatccaaccgggaaaagctgtca
tcagaggactgggacgctgttccggaacactctagctttggaaagcctagaaactctaaa
gacgaagatctaggtaaaagcgtgccgatatctccaaccaccattcctattggtggaaac
ggttctctgaatcgacagcataccgaaggccccgcaagcaaaggaacgaaccatgatgct
gatcaacctgacaacggggaaacggccgttcgtgacatggagaatctgcgacgaaacaat
caactgcttcgtcaggacagttcagattccgaggcactcaccagcatatattcatcctcc
tatgactacaacatagacatggaggcaagtgggacaattgtgcctgatgtggatgacatg
cgatcgcctcatgccccaaagccgccgccgaatttgccacatgcatctggaagtgcgccc
ccagtcatggatccaaccacagaggatggcttgttactgtccgacttcacggccatgcat
gttgatgcagaagcagcatcaccatattccgtgatcggcttgcttaacagcattcttgca
tatcatacaaaagcgtcggatgcgcagtttccttcgattttgcttctccttctccaatca
ctccttccgcagacacaaagcccaacagatgaccccggtacaaacgtaggcgatgtgctt
aacgcctttgcagatacctttgtggctcttgggctcagtccagcacaggcaaaggccatt
ctctcgacacagttgagtcagcttatagccacagggatcaatccttatcaagcagagtct
attcttcatacctaccactcacaactgcactcgttatcattgttcaactctgcggctatg
ctacgcaggctggcctatcccgcctatcccgccgtgtacgaacaagcgctcaaagaaaca
caactcggattactgtgcctcagctgcaagtcaccaatcaacaatcccaaagacaagatg
cgatgtgagtcgtgtaagcgaacacaggcgccatgcccaatttgctgggccaagtatccg
gcctttgagccgcttacagcaaaaaaggccaagtcaaagtttcgttctaatctgaaggac
agaggacataagcggcagcgatcgtctctgacttcgggccaaaaccttggggacgatcgt
gatgctgtcgggccatcaccgtctgtcccgacagagtggtctgcgcctacggccacgttg
tggacgtggtgtccgctttgtggacacggtggacacgcgaattgtctttcgacatggttt
gcagacccagttttatcagaaggtgcatgcccaaccgaaggttgtctctgtgattgcgtc
cagggcactcggcgagacgcaaagattgaagaaatgctgctcaagaaggcagaaaaggac
cgatctaaactggtacgcaaaggtgatgattggaaggtaaaagagagtaaagccgtctcg
gcagtccggaatgcggctctcgataccattccagctcatcctcagcattccggctccggg
accacgacgccgacgcgcagatag
DBGET
integrated database retrieval system
