Bipolaris sorokiniana: COCSADRAFT_192625
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Entry
COCSADRAFT_192625 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
COCSADRAFT_192625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_192625
Enzymes [BR:
bsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COCSADRAFT_192625
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
COCSADRAFT_192625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
19133812
NCBI-ProteinID:
XP_007703025
JGI:
Cocsa1_192625
UniProt:
M2SXT5
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MSDSELLAKITYFEEQALLNFSDDEPYTPNESVLNLERALEESKPVLLTSLLSHSSSFNG
PTPREIQAQFEEHTERRRTSNRQINQKLTRSSTVPQTETAESVQIPKSRSGLNVGTNNGK
SRLKRTISLSQIFDKECTPFYKRVGAIPRELKSGKTVKPAHNIKLVPENKQLLKEKIVYF
YPNDDISMARRRRIHKVIQLGAAWADKWSDSITHVMSDDGTYTYNQLVRHLGRPIPPNVV
VVKFDPYVPQCISRGELLDPTVSYFAVKDVQGVGELDQAPHLSHISTTSQSSLKIKSSKR
KKATQETQKTDSHPTEESVPSTHPNTDAAPSSPLEETVEDSFIMSSPGAAIVSGQKGRDQ
IGDALFQAIQEAKSLAYLPINENEEAELVSPRGVNTIENLNTDQELLPMGTDYLKRLSVL
SKASALRDKKSFGMNSFQCMDPSASSNVSWNPNARTIQILEEMCKYYDRMQDQWRTLSYR
KCVATLKKQTVKITTAEQAAKLPSIGTHLAAKIEEIVLTDRLRRLESTCHNPQDVALRLF
LGIYGVGLVCANKWIQAGHRTLEDLKTKATLSENQKIGLENYHDFNSRIPRAEVEAHGVI
VAAALKEIDPEFSATIMGSYRRGAQDSGDIDIILSRPNMSPTAMSTTIFEVLIPHLYKTG
FLKASLRSSRYSDSSSSKWHGASCLPSSTIWRRIDFLIVPEQEMGAALLYFTGDDVFNRS
MRLLARKKGMKLNQRGLYMDVLIGRKGEKLNHGVLIEGKSEKRIFEILGVPWREPGERVC
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactccgagctcttggcgaaaataacttatttcgaagaacaggcccttcttaat
ttctcggacgatgagccatatacccctaacgaaagtgtgctcaaccttgaacgcgcgctg
gaagaatcaaaacctgtactattaacctcactactgagccactcgagtagtttcaatggg
ccaacgcctcgagaaatacaggcacagttcgaggagcatacagagagacggcgcacttct
aatcggcaaatcaatcaaaagttaactcgatcatctacggtaccacaaactgagaccgcc
gagagtgtccaaatccccaagtcacgcagcggtcttaatgtgggtacaaataacggcaaa
agccgtttaaagaggacgatatctctgtcccaaatattcgacaaagaatgtaccccgttt
tacaaacgcgtgggcgccatccctcgtgagctcaaaagcggaaaaactgtgaagcctgcc
cataacatcaagcttgtccccgaaaacaagcaattgctcaaagagaagatcgtctacttt
taccctaatgatgatatctccatggcacgacgaagacgcatacacaaggtcattcagctt
ggtgctgcatgggcggacaaatggagcgatagtatcacgcacgtcatgtctgatgatggg
acgtacacatataatcaattggtgcggcatctcggcagaccaatacctccaaacgtcgtg
gtggtcaagttcgatccatatgtgccgcaatgtattagtcgtggggagctcttagaccct
actgtttcatacttcgctgtaaaagatgtccaaggggtaggcgaacttgatcaagcacca
cacctctcccatatatcaactacatcgcagagctcgctaaagataaaatcctctaaaaga
aagaaagcgacacaggagacacaaaagaccgactcacaccccacggaagaaagcgtacct
tccactcatcccaatacagatgcagcgccctcgagtcctctcgaagaaacagtagaagac
agcttcattatgtcctctccaggggctgctatagtctcaggacagaaaggtagagatcaa
attggggatgccctgttccaagccatccaggaggctaagtccctcgcgtatctacccatt
aatgaaaatgaagaggcagaactagttagtccaagaggtgtgaatactatagagaacttg
aacacggatcaagagctattgccaatgggtaccgattacctcaagaggctcagtgttttg
tcgaaagcatcagcgttgcgcgacaagaaatcgttcggtatgaacagtttccaatgtatg
gacccaagtgccagtagcaatgtttcatggaacccaaatgcccgaactattcagatacta
gaagagatgtgtaagtactacgatagaatgcaggaccaatggagaaccctaagctatcga
aaatgcgttgccacgctgaagaaacaaacggtcaagatcactactgcagaacaagccgca
aagctaccttctatcggtacacaccttgccgcaaagatcgaagaaatagtactcacagac
cgtctccgaagactcgaaagcacctgtcataaccctcaagacgtagccctacgtttgttt
cttggtatttatggcgtcggccttgtctgtgccaacaaatggatccaagccggccaccgc
actctcgaagatctcaagaccaaagctacgctctctgaaaatcagaagatcggactcgaa
aactaccatgatttcaactcccgcatcccacgcgccgaagtcgaggcccacggcgttatc
gtcgccgccgcactcaaggaaatcgacccggaattcagtgcaacgataatgggaagctac
cgccgtggagcacaggactcgggcgacatcgatataattctgtcacggcccaacatgtca
cctaccgctatgagcactaccatcttcgaagtcctcatcccacacttatacaaaaccggc
tttctcaaagcctcactaagatcatcccgttatagcgactccagcagctcaaaatggcac
ggcgcatcctgtctcccgtcctccaccatttggcgcagaatagacttcttgatcgttccg
gagcaggaaatgggtgccgcactgttgtactttacgggtgatgatgttttcaataggagt
atgaggttgttggcaaggaagaagggtatgaagcttaatcaaagggggttatatatggat
gttttgatagggaggaagggggaaaagctgaatcatggggtgttgattgagggtaagagt
gagaagaggatttttgagattttgggcgtgccatggagggagccgggggagcgggtttgt
tag
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integrated database retrieval system