Bipolaris sorokiniana: COCSADRAFT_192893
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Entry
COCSADRAFT_192893 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_192893
Enzymes [BR:
bsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCSADRAFT_192893
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
90S particles
Helicases
COCSADRAFT_192893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
19133828
NCBI-ProteinID:
XP_007703433
JGI:
Cocsa1_192893
UniProt:
M2S1K5
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MPGFAKRKRTEDARVAAVSASKKARPSSAPAKKVVAKPAPPPEPESSDDDEEEGEGDGSD
NAEDQNVANASGSEQEAEAATVGADEAKKTFADLGVREELCDACENLKFTNPTPIQAQAI
PLALEGRDVIGLAETGSGKTAAFVLPILQALLEKQQSLFGLILAPTRELAYQIAQQVDAL
GSIINVKCATLVGGMDMVPQAIALSKKPHIIVATPGRLLDHLENTKGFSLKHLKYMVLDE
ADRLLDLDFGPVLDKILKVLPREGRHTYLYSATMSSKVESLQRAALQNPVRVSISSSSHQ
VVSTLLQRYIFLPHKYKDLYLIHLLNDNIGHPTIIFSRTVNETQRIAILLRTLGFGAIPL
HGQLSQSARLGALNKFKTQSRDILVATDVAARGLDIPAVDLVVNFDLPSDSQTYVHRVGR
TARAGKSGKAVSFVTQYDLEIWLRIENALGKQIPEEVINKDEAMVYMERVNEAQRIAVRE
MKDLHEQRGKGGRGGRGGGRGRGGGARRGRDQMDTEEG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatttgcgaagagaaaacgaaccgaagacgcgcgtgttgcggctgtgtcggcg
tcaaaaaaagcgcgaccgtcgagcgcaccggcgaaaaaagttgtggcgaagcccgcacca
ccaccagaacccgagtcgagcgatgacgacgaagaggagggagagggggatggttcagac
aatgctgaagatcagaatgtagcgaatgcatctgggtctgagcaagaggcggaagctgct
acagttggcgcagacgaggcaaagaagacatttgccgacctgggcgtgcgcgaagaactt
tgcgacgcttgcgaaaacctcaagttcacgaacccgacacccatccaggctcaggctata
cctctggctctcgagggtcgcgatgtcatcggacttgctgaaactggatctggaaaaacg
gctgcgttcgtcctaccaattcttcaagcactgctggagaaacagcaatcgctctttggg
ctgatcctggcaccgacacgagaattggcatatcaaattgcacagcaggttgacgctctc
ggcagcatcatcaatgtcaagtgtgcgacgctggtgggaggaatggacatggtaccccaa
gcaattgctctgtctaagaaaccacacattattgttgctacacctggacgtctactcgat
cacctggagaataccaagggtttctctctaaaacatctcaagtacatggttctcgacgaa
gccgatcggttgctcgaccttgatttcggaccggtcctcgataagatcttgaaggtacta
cctagagaaggacggcacacatacttgtactcggcgaccatgagcagcaaagttgagagc
ttgcaaagagctgccctgcagaaccccgtccgagtgagcatcagcagttcgtcccaccaa
gtcgtttcaacactccttcaacgatacattttccttccgcacaagtacaaggacctgtac
ctcatccatctcctgaacgacaacattggccacccaaccatcatcttcagccgcacagtc
aacgagacacagcgcatagccatcctcctccgcactctcggcttcggtgctatccctctt
cacggccaactctcacagtccgctcgtctgggtgcactcaacaagttcaagactcaaagc
cgcgatatcctcgtagctactgacgtagcagcccgtggtctggacattcccgccgtcgat
ctcgtcgtcaactttgacctacccagcgattcacagacatatgttcaccgcgttggccga
acagcacgtgctggaaagtctggcaaggctgtttcatttgtcacacagtacgatcttgaa
atctggctgcgtatcgagaatgcgcttggtaagcagatcccagaagaagtcatcaacaag
gacgaggcgatggtgtacatggagcgagtcaatgaggcacagaggatagcagtcagagag
atgaaagacctccacgagcagaggggcaagggtggccgtggaggcagaggcggcggaagg
ggtcgtggtggaggagcaagaagaggacgcgaccaaatggacactgaggaaggttaa
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