Bipolaris sorokiniana: COCSADRAFT_193151
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Entry
COCSADRAFT_193151 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
COCSADRAFT_193151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_193151
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
COCSADRAFT_193151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
VWA
VWA_2
DUF5867
Bag6_BAGS
Motif
Other DBs
NCBI-GeneID:
19133840
NCBI-ProteinID:
XP_007703800
JGI:
Cocsa1_193151
UniProt:
M2QZG0
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MAAKEATVYILDLGRSMGKKRNGRDQTDLDWALEYVWDKITTTVATGRKSALMSVIGCRT
DETDLASIIEEDEGYDHIRVFSKIKQYLLGDIRNLQEHLKSSRTNNGDILSALAVAIHMI
DTATRGAKGNPLKYDRRIIIVTDGRGEMVTDDLEQLTSKIKDPEAPFEITLLGIDFDDPD
VGFKEENKDPQKAQNEGILKSFIADCDGNFGTLATAIDQLHMPRLKETRPVHSYRGSLTL
GDPTKYDATITIDIERYPCTMIAKPPTASSFVIRTDATGSSGPVIESSAAGTDQDQAATD
LSAVRNQRVYQVESQTEPGIKKNVEMDELERGYEYGSTAVHISESDMNVVKLETQQAMEL
VGFVRAEDFERYLPLSRTNFIVPQKANQPAQLGLSSFIHALYEADCYAVARLVAKDLKPP
VLLLLVPRIEPEWEALVDVELPFEEDMRRYKFPPLDRKLTVSGKVITEHKDLPTKNLVDA
VSDYVDAMDLSTFGRDEDGNEDEYAKPEDTFSPLVHRINQVIRWRATHPDPSLPIPDPPE
ILIKYSMPPADLVVSAQKQLNAVKQAAELKKVPPKVKGRGKRQRTERDKPLSGLDVDQLL
GNPKRVKIESKNLIPSFKQALSASDDLDAIQDAADGIAKEIRSLISNSVGDNAYQRALEA
IRVMREELTELEEPEIYNAFIKQLKEDILGGKLNGNRREMWWRIRGNRYGLIDSKRSYVS
PVTEDEAKRFYEV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaagaagcgaccgtctacattctggacctcggtcgttccatgggcaaaaag
agaaatggccgcgaccagactgatcttgattgggccttggaatatgtctgggacaaaatc
acaaccactgttgcaacaggcagaaaaagcgcgctgatgagcgttatcggttgtcgcact
gacgaaacagatctcgctagtatcatagaggaggacgaaggctatgatcatatcagggtc
ttctccaaaataaagcaatatctccttggcgacatccgcaatctccaagaacatctcaag
tctagtagaaccaacaatggagatattctctctgctctcgcagtagcaatacacatgatt
gataccgcaaccaggggtgccaagggaaaccctctcaagtacgaccgcagaatcatcatc
gtgactgatggtcgtggggagatggtcacagacgatttggagcaactaacatcaaaaatc
aaagacccggaggctcccttcgagatcacactactcggcatcgactttgacgaccccgac
gttggcttcaaagaagagaacaaagacccccaaaaggctcaaaacgaaggcatattgaaa
agcttcatagcagattgtgacggtaacttcggcaccctagccacagccattgaccaactt
catatgcctcgtctcaaagagacgcggcctgtccacagctatagaggatcgctaactttg
ggcgaccctaccaagtacgatgctaccattacaatcgatattgagcgatacccatgtacg
atgatagcaaagccaccaacagcaagttcgttcgtcatacggacagacgctactggctca
tcaggcccggttattgagtcctcggctgctggaactgatcaagaccaagcagcaaccgat
ctctcagcagtacgaaatcagcgtgtatatcaggtggaaagccagactgaacccggcatc
aagaagaacgttgaaatggacgagttggagcggggctacgaatatggcagtacggccgtt
cacatttccgagtccgacatgaatgttgtcaaactggaaacacaacaagcgatggagcta
gtgggttttgtcagagctgaggacttcgaacggtacctccctctcagtcggacaaacttc
attgtcccacaaaaggccaaccagcctgctcaattgggcttgtcatctttcatacatgca
ctatatgaggctgattgctacgcagtcgcaaggctggttgcaaaggatttaaagccccca
gtcttgctactgcttgtcccgcgcatcgagccagagtgggaggctctggtagacgtagag
cttcctttcgaagaagacatgaggcggtataagttcccaccgttagatcgaaagcttaca
gtcagcggtaaagttataacggagcacaaggatctgcccactaaaaatctcgtcgacgca
gtgagcgactacgtcgatgccatggacttatcaacctttggccgcgacgaagacggaaac
gaagacgagtacgccaaaccagaagatacattctcacctcttgtccaccgcatcaaccag
gttatacgatggcgagcgacacatcccgatcccagcctgccgatacctgatccgccggaa
attctcatcaaatattccatgccaccagcagatcttgtcgtgtcagcacaaaagcaactc
aatgccgtcaagcaagcggcagaattgaagaaagtaccaccaaaggtcaagggccgaggc
aagcgccagcgtaccgagcgtgataagcctctttcaggtttggatgtcgatcaactcctg
ggcaatcccaaacgcgtcaaaatcgagtctaaaaatctgattccctcgttcaaacaagct
ctctctgcttccgacgacttggatgccatccaagatgccgctgatggcattgcaaaagaa
atccgctcgctcatcagcaatagtgtcggtgacaacgcgtaccagcgtgcgcttgaggca
attcgtgtcatgcgtgaagaactcactgagcttgaggagccagagatctacaacgcattc
atcaagcagttgaaagaagatattctaggtggaaagctaaacggtaaccgtagagagatg
tggtggagaatcagaggcaaccggtatggactcatcgattccaagaggagctatgtcagt
cctgttacagaagacgaggcgaagagattctacgaggtctga
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