Bipolaris sorokiniana: COCSADRAFT_194278
Help
Entry
COCSADRAFT_194278 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_194278
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
COCSADRAFT_194278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spb1_C
DUF3381
FtsJ
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
19133883
NCBI-ProteinID:
XP_007705325
JGI:
Cocsa1_194278
UniProt:
M2S8C3
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MAIQKKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQ
VASEVMPANSLIVGVDLAPIKPIPRCITFQSDITTDKCRATLRQHLKHLKCDTVLHDGAP
NVGTAWVQDAFTQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNSLLWVFNQLFTKVEA
TKPPSSRNVSAEIFVVCRGYKAPKHLDPKFLDARSVFAELADPTPNNEAKVFKPEVKKRK
REGYEEGDWTQFKEAPVSDFIQTTDPIAMLGGLNKLSFEQKPNGDIAIATIDKLPETTKE
IRDCCADLKVLGRADFKRLLRWRLKVREIFGFASKKDKADEAKAKEAQEGEEVAEIESMD
EEMQIQEELERLKEKDTKAKKKQRRTENERRQKEITRLQMNMATPFDIGLEQVGPTGEDA
MFGLKAVDKAGALNKIAKGKMVQIVEKEKPEEVEEELETDEEEDYLERDLDAMYGEYVEQ
RSARDAKYRAKRARKQDDDGEWNGFSDEDKEQSDDEELVQDADSDWSSDEEEGPKELITD
LDRDGQSKRGLTKRAERFFDQDIFKGIDGLDDLEEGDDSGIDVEGDTEMKEESATQPSAS
EKTLSIRTSKKAASPAVAFDDESSDEDDDKIEEVARDETQWEQDSMPMKNGKPDIDIITA
EAMTLAHQMATGQKTKHDLLDESFNRYSHRDVDGLPDWFLDDENKHSKIQRPTSAAAAAA
IKEKLRALNARPIKKVREAQARKKFKAAQRLEKLKKKSALLADEEGMTEKEKAQSIARLM
SRAAKKKPKQKVSVVVARGGNKGIKNRPKGTKGKYKMVDARLKKDVRGEKRAAKRNKKR
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccaaaagaagcacggaaaaggtcgtctcgacaagtggtacaagcttgccaaa
gaaaagggctaccgcgcgcgtgctgcattcaagttgatccaactgaataaaaagtacaac
tttttagaaaagagcaaggtcttgattgatctttgcgccgcgccgggatcatggtgtcaa
gtcgcttccgaggtgatgcccgcaaattccctcattgtcggcgtcgatctcgccccaatc
aagcctatcccgcgatgcatcaccttccagagcgatatcacaacagacaagtgccgagcg
acgctgcgccagcaccttaagcatcttaagtgcgatacagtccttcacgatggtgccccc
aatgtcggaactgcgtgggtccaggatgcctttacccaggccgaacttgtgctgcaatcc
atgaaactggcgactgagtttttggtcgaaggtggaacttttgttaccaaggtcttcaga
tcaaaagactacaactcgctactctgggtcttcaaccagctcttcactaaagtcgaggca
acgaagccgccatcttcccgaaatgtatcagccgaaatcttcgtcgtctgccgtggctac
aaggctccaaagcatcttgaccctaagttcctcgatgcccgcagcgtcttcgccgagctc
gcagatccaacgcccaacaacgaagcaaaggtgttcaagcccgaagtgaagaagaggaag
cgtgagggttacgaggaaggagattggacacagttcaaggaagctccggtatccgacttc
attcaaaccaccgaccccattgccatgctcggtggcctgaataagctgagtttcgaacaa
aagcccaacggcgacattgccatcgccaccatcgacaagcttccagaaaccacaaaggaa
atcagagactgctgcgcagatctcaaggtcttgggacgagccgacttcaagcgccttctc
cgttggcgacttaaagtgcgcgaaatctttggctttgcgtcaaagaaggacaaggctgat
gaggccaaggctaaagaagcgcaagagggcgaggaggttgccgagatcgagtccatggac
gaagagatgcaaatccaggaagagttggaacgcctgaaggagaaggatacaaaggcgaaa
aagaaacagcgtcgcacagaaaatgagcgaagacagaaggaaattacgcgactacaaatg
aacatggccacaccgtttgacattggtttggagcaggttggacctaccggcgaagacgcc
atgtttggtttgaaagccgttgataaggccggtgctcttaacaagattgctaaaggaaag
atggtgcagattgtcgagaaagagaaaccggaagaggttgaggaagaacttgaaaccgac
gaagaagaagactatcttgaacgagaccttgacgctatgtatggcgaatacgtcgagcaa
agatctgctcgcgatgccaagtaccgggcaaaacgcgctaggaaacaggacgatgacgga
gaatggaacggtttctctgacgaggacaaggaacaaagtgacgacgaagaacttgtacaa
gacgccgacagtgactggagcagcgacgaagaggaagggcctaaagagctaatcactgat
ctcgatcgcgacggacaatccaagcgaggtcttaccaagcgtgccgagcgtttctttgat
caggacatttttaagggaattgatgggctcgatgaccttgaggaaggtgacgacagtggc
atcgatgttgaaggcgataccgaaatgaaggaggagtcggctacacaaccttctgcatca
gagaagacgttgtcaatccgaacaagtaagaaggccgcttctcctgcagtagctttcgat
gacgagtcctctgatgaggatgatgacaaaatcgaagaagtcgcgcgcgacgaaacacag
tgggaacaagattccatgcctatgaaaaacggcaaaccagacatcgacatcatcacagca
gaagccatgaccctggcccatcagatggctaccggtcagaaaacaaaacacgacctcctg
gatgaatcattcaaccgttactcacatcgtgacgtcgacggtcttcccgactggttcctc
gacgacgagaacaaacattccaagatacagcgcccaacttcagcagccgcagccgcagcc
attaaagagaagctccgcgcgctgaacgctcgccctattaagaaggtccgtgaagcacag
gcccgcaagaaatttaaggctgcccagcgcttggagaagctcaagaagaagtctgctctc
ttagcagatgaggagggtatgacagagaaggaaaaggcccagagtattgcacggttaatg
tcgagagctgcaaagaagaagcccaagcaaaaggtcagtgttgttgtggctagaggaggt
aacaagggtatcaagaacagaccaaagggcaccaagggcaaatataagatggttgatgct
aggttgaagaaggatgttagaggcgaaaagagggcagcgaagaggaacaaaaagaggtag
DBGET
integrated database retrieval system
