Bipolaris sorokiniana: COCSADRAFT_198733
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Entry
COCSADRAFT_198733 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCSADRAFT_198733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_198733
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
COCSADRAFT_198733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
AAA_29
AAA_27
AAA_21
Motif
Other DBs
NCBI-GeneID:
19134070
NCBI-ProteinID:
XP_007698904
JGI:
Cocsa1_198733
UniProt:
M2T9F2
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MARGVEGNEMSTPRPSQKKQPSSVSQSGKGQKSILGFFQKKSTNSPSPAPSDVTPVQKTP
TSKISSKAFTKPSAAITPVPSSDAPDYSSPIKQDRELTVGRNKENEIADVTPSSPTRKAR
KPINYAESDDEDDDVLGPIANNARGRATKRQRVVVDDDSDDEFGLDAATQRAMLEEEEED
DDVDDFIVPDDSEEEVVSKKRKRPASTKPRAKASLASSPPPIVNDNDVEDEADIVINSTS
TAQQWIYDPENPTVFKPRKAVPSLKKELSVRAKAKPSASEPEARYPWLANMQDADRHPPD
HPDYDPRTLFIPPAAWREFSPFEKQYWEIKSKWWDTIVFFKKGKFYELYEKDASIGHQLF
DLKLTDRVNMRMVGVPEASLDMWATQFVAAGYKVARVDQMESALGKEMRERDDKGKTPKK
AEKKGKEVIRRELATVLTSGTLVDTGMLQSEMSTYCMAIKEIDRDNLPAFGIAFVDTATA
QFQLCEFTDDIDMTKFETLIAQMRPGELLLEKSCVSAKALRILKNNTGPTTIWNWLKLNK
EFWPADITIREIEVNKYFELPTEDNIEAWPPVLREAREKELVMSAFGALLQYLRTLMIER
DLVTLGNFQWYDPIRKATSLVLDGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRL
LRQWVCHPLADAQKINARLDAVDALNKDSAIMENFSGSLSKLPDLERLISRVHAGRCKAQ
DFLKVLEGFEQIEYTISLLKQFSEGEGVIGQLISSMPDLAACLEKWKSAFDREAARKDGI
LIPEAGVEEDYDNSQAEIDSCEANLETLLKKVRKEQGSNAIIYNHLGKEIYQLEVPKKVK
VPNSWDQMSATAKVTRYYTPELRKLVRALQEAQETHGQITREVATRFCQRFDEDYKTWLA
AVKIIAQLDCLISLAKASASLGEPSCRPVFVEGERTVVEFEELRHPCMLNTVDDFIPNDI
KLGGDEANISLLTGANAAGKSTILRMTCIAVILAQVGCYLPCTSARLTPVDRIMSRLGAN
DNIFAAQSTFFVELSETQKILSEATSRSLVILDELGRGTSSYDGVAVAQAVLHDVATRVG
CVGFFATHYRSLAKEFEFHPEVQNKRMRIHVDDESKSITFLYKLEEGVAEGSFGMHCAAM
CGIPSKVIEDAEKAAKEWEHTSRLGERMEVKKDEGGVYVPLGLQSDVAWALREGLEGVGE
RAMDVLLEAIATL
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcggcgtcgaaggaaacgaaatgtcaacgcctcgcccatcccaaaagaagcaa
ccttcctcagtctcccagtcagggaagggccagaaatcaattctcggcttcttccagaag
aagtctacaaattcaccaagccccgcaccgtctgatgtcacaccagtccaaaaaacacct
acttccaaaatttcctctaaggcctttacaaagccttccgctgccatcacgccggttccc
agtagcgatgctccagactactcaagtcctatcaaacaagaccgagagctcacagtaggg
cggaacaaggagaatgaaatagcggatgttactcctagtagcccaacacgtaaagctaga
aaacccatcaattacgcagaatctgacgatgaagatgacgatgtactcggacctattgca
aacaacgcgaggggtcgggctacaaagcgccagcgagtggttgtcgacgacgattccgac
gatgagtttggtttggacgctgccacgcaaagagcaatgctggaagaggaagaggaagac
gacgatgttgatgatttcatcgtacccgatgattccgaagaagaagtcgtatcgaagaag
cgcaaacgcccagcatctacaaagccacgcgccaaagcctcactggcatcgtcaccacca
cctattgtcaatgacaatgatgttgaggatgaagcagatatcgtaatcaatagcacatct
acagcacaacaatggatatacgatcccgagaatcctacggtattcaagccacgaaaagcg
gttccttctttgaagaaggaattaagcgtaagagccaaagcgaagccctctgcttcagag
cctgaagcaagatacccatggctagcgaacatgcaagacgccgaccgccacccgcccgac
catcctgactacgatccccgtaccttgttcatcccgccagctgcctggcgtgaattttcg
ccttttgaaaagcagtactgggagatcaagagtaagtggtgggacactatagttttcttc
aagaaaggaaagttctacgagctctacgagaaggatgcatcgattggtcaccagctcttt
gatctcaagctgactgatcgtgtcaacatgaggatggtgggtgttccagaagcctcgttg
gatatgtgggcaacacaatttgtggccgctggctacaaagtggctagggttgaccagatg
gaatctgctctgggcaaagagatgcgcgaacgtgacgataagggcaaaacgccaaagaaa
gctgagaagaagggcaaggaagtcattcgtcgagaactggccactgtactaacatcaggt
actcttgtcgacactggcatgctccagagcgaaatgtcgacctactgcatggcgatcaag
gagattgaccgggacaatttgcccgctttcggaattgcgtttgttgacacggcgaccgcg
cagtttcagctctgtgagtttacagatgacattgatatgaccaaattcgaaactctcatt
gcgcaaatgaggcccggcgagttgctcttagaaaagtcgtgtgtttcagcaaaggcgctt
cgtattctgaagaacaacacaggaccaaccaccatctggaactggctgaagctgaacaaa
gaattctggccagctgacatcacgatccgagaaatcgaagtcaacaaatatttcgagttg
ccaacagaagacaacatcgaagcatggccaccggtgttacgcgaagcccgcgagaaggaa
cttgtcatgtccgcattcggtgcccttctccagtatctgcgaacactgatgattgagcgc
gatctcgttacgctcggcaactttcagtggtatgatcctatccgcaaagcgacaagcttg
gtgctcgacggacagagtttgatcaatctggaaatctttgcaaatacgtttgacggagcg
acggagggcacattgtttgctatgctgaaccgctgcatcacgccgtttggcaagcgacta
ctccgacaatgggtttgccacccacttgcagacgcacaaaagatcaacgctcgccttgat
gccgtggatgcgctgaacaaggactcggctatcatggagaacttcagcggctcactaagc
aagctgccagatcttgagcgtcttatctcccgcgtgcatgctggccggtgcaaggcacaa
gatttcctgaaggtcttggaaggtttcgagcagattgagtacaccatcagtttgctgaag
cagtttagcgaaggagagggcgttattggccagctcatttcatcgatgccggacctagct
gcatgtctcgagaagtggaagtctgcctttgaccgtgaagcagccaggaaagatggaatt
ctgattcctgaagccggcgtcgaagaagactacgataacagccaggcggagattgacagt
tgcgaggccaatctcgagacgctgttgaagaaggtgcgcaaagaacagggttcaaatgca
atcatctacaaccacctcggaaaggagatttatcaactggaagtgccgaagaaggtcaag
gtgcccaatagctgggaccaaatgtcagccacagccaaggtcactcgctactacacgccc
gagttgcggaagctggtgcgagcattgcaagaagcgcaagagactcacggtcagatcact
cgcgaggttgccactcgtttctgccagcgctttgacgaagactacaagacttggcttgca
gcagtcaagatcattgcccagctcgactgcctcatcagtctcgcaaaggcgtctgcgtca
ctgggagagccaagttgccgacccgtctttgtagagggcgaacgaaccgttgtcgagttt
gaagagcttcgccacccgtgcatgctcaacaccgtcgatgacttcattcccaacgatatc
aagctgggcggtgatgaggccaacatcagcctgctcacgggtgccaatgcagctggtaaa
tccacaatcctgcgtatgacatgcatagccgttatcctcgctcaggtgggttgctacttg
ccgtgtacatcggccagactcacacctgtcgaccgtatcatgtctcgtctgggcgccaac
gacaacatcttcgccgcacaatccaccttcttcgtcgaactgtctgaaacacaaaagatt
ctgtcggaagcgacatcgcggtcgctggtcattctcgacgaacttggtcgcggtacctca
tcctacgacggcgtggcagtcgcacaggctgtgctgcacgacgttgcaacgagagtggga
tgcgtgggcttcttcgccacacactaccggtcgctcgccaaggagtttgaattccacccc
gaagtacagaataagcgtatgcgtatccacgttgacgacgaatctaaatcaattaccttc
ttgtacaagcttgaagagggagttgcggagggtagctttggtatgcattgtgctgccatg
tgcggaattccgagcaaggtcattgaggatgcggagaaggcggctaaggagtgggagcat
acgagtaggttgggtgagaggatggaggtgaagaaggatgagggtggtgtgtatgtgccg
ctgggtctgcagagtgatgttgcgtgggcgctgcgagagggattggagggagtaggggaa
agggcaatggatgtgctgctcgaggctattgctacgctttga
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integrated database retrieval system