Bipolaris sorokiniana: COCSADRAFT_199919
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Entry
COCSADRAFT_199919 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03267
peptide chain release factor subunit 3
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSADRAFT_199919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_199919
03012 Translation factors [BR:
bsc03012
]
COCSADRAFT_199919
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
COCSADRAFT_199919
Translation factors [BR:
bsc03012
]
Eukaryotic type
Release factors
COCSADRAFT_199919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
19134117
NCBI-ProteinID:
XP_007700297
JGI:
Cocsa1_199919
UniProt:
M2SB75
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MADNWEQEEERLSQQAQGMNLNNAPTFTPGAQSFQPGASSFVPGQAYGGYQGGYNQYGQQ
YGGYNQYANQGQYYQQQQGYPQYGQQYGQQQGYPNYGQYQGQQNFQPQQQQQQQSQGQAP
VRIAKRGDTDVAGSAGAAPAAEAKKEAPKAKVLSIGGDSAPKAKVLSIGGDTTTPKVEKA
GGTKVLSLGTPGAPSAAKEKADKEKGTIDAGTKVTAAKAIEKTGEPTPASAGSGRTSPTP
SSGRNSPTPKEKAPERPMAKQPDIENEIADIDEATLAEIYGKEHVNIIFLGHVDAGKSTL
GGSILISTGMVDERTLDKYKKEAKDAGRETWYISWALDLNKEERAQGKTIEVGRGFFETE
KRRYSILDAPGHKTYVPNMISGASQADVGILVISARKGEYETGFEKGGQTREHAMLAKTQ
GVNKILIVVNKMDDPTVEWSEDRFKECTTKVVAFLKGLGYNPKTDISMMPVSAQTFTGIK
TRVPKDLAPWYDGPSLLEYLDNMQALERKLNAPFMMPIAAKYKDMGTMIEGKIESGIIKK
ENKYLMMPNRQTIHISALFGEQEDEIPGAACGDQIRVRIRGVEEEDILPGYVLCSPKRPV
HCVSQFEAQVVLLDIKSIVTAGFNCVLHVHAAQEEVTISALLHKLEKGTGRRSKKAPGFA
TKGMSIIARLQITGTAGSICVERFEDYPQLGRFTLRDQGQTIAIGKITKLITDPEA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaactgggagcaagaggaggagcgcctctcgcagcaggcgcagggcatgaat
ctcaacaatgcgcccaccttcacccccggagcgcagtcgttccagcccggcgcgagctcc
ttcgtgcctggccaggcctatggaggctaccagggcggctacaatcagtacggtcagcaa
tatggaggatacaaccagtacgcaaaccagggtcagtactaccagcagcaacaaggatac
cctcaatatggccaacaatatggccagcagcagggctatcccaactatggccagtaccag
ggccagcagaacttccagccccagcagcagcagcagcaacaaagccaaggccaggctcct
gtgcggatagcgaagcggggagacacagacgttgccggctcagcgggcgccgcccccgct
gctgaagccaaaaaggaggcgcccaaggccaaggtcctgtccattggcggcgacagtgca
cccaaggccaaggttctctcgatcggtggcgacactactactccaaaggttgaaaaggca
ggcggaaccaaagtccttagcctcggaacaccaggggcaccatccgctgccaaggaaaag
gccgacaaggagaagggaaccattgatgctggaaccaaggtgactgctgcaaaggccatt
gaaaagactggagaaccgaccccagcttcagcaggctctggccgtacttcaccaaccccc
tcgtcaggtcgcaacagcccaactcccaaagagaaggcccctgaaaggcccatggccaag
caaccagacattgagaacgaaattgccgacattgacgaggcgactctcgccgaaatctat
ggcaaggaacatgtcaacatcatcttcttgggtcacgttgacgcaggaaagtctaccttg
ggtggcagtatcctcatttccactggcatggttgatgagcgaacccttgacaagtacaag
aaggaggcaaaggatgctggtcgagaaacatggtacatttcatgggcactcgatttgaac
aaggaggagcgtgcgcagggtaagactatcgaggtcggtcgaggtttcttcgagacggag
aagcgacgatactcgattctcgatgccccaggccacaagacctacgttcccaacatgatc
agtggtgcttcacaggcagacgtcggtattcttgtcatctctgctcgaaagggagagtac
gagactggattcgaaaagggtgggcaaacccgagagcacgccatgttggccaagacgcag
ggtgtgaacaagattctcatcgtcgtaaacaagatggacgatcctactgtcgaatggtca
gaggaccgattcaaggaatgcacaaccaaggttgtagcctttttgaagggtctcggatac
aaccccaagactgacattagcatgatgcctgtcagcgctcaaactttcactggaatcaag
acccgtgtccccaaggatcttgcaccctggtacgatggaccatctcttcttgagtaccta
gataacatgcaggcccttgagcgcaagctcaatgctcccttcatgatgcccatcgcggca
aagtataaggatatgggcaccatgatcgaaggcaagatcgaatctggtatcatcaagaag
gagaacaaatacctcatgatgcccaaccgacaaaccattcacatctccgccctgttcggt
gagcaggaagacgaaattcctggcgcggcttgcggcgaccaaattcgtgtgcgaatccga
ggtgtggaagaagaagatatcttgcccggttacgtgctgtgctcgcctaagcgacccgtt
cactgcgtttcccagtttgaggctcaagtcgtacttttggacatcaagtctatcgtgact
gctggtttcaactgcgttcttcacgtccacgcagcacaagaagaagtcaccattagcgca
ctactgcacaagcttgagaagggtaccggaagacgatcaaagaaagcacctggatttgcg
acaaagggcatgagcatcattgcacgattgcagattaccggtacggccggaagcatttgt
gttgaacgtttcgaagactatcctcagcttggtcgtttcactctccgtgaccagggtcaa
acgattgccatcggaaagatcaccaagctcatcacagatcccgaagcttaa
DBGET
integrated database retrieval system
