Bipolaris sorokiniana: COCSADRAFT_204886
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Entry
COCSADRAFT_204886 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_204886
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
COCSADRAFT_204886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
EIF3I
WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_like
Beta-prop_VPS8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
19134302
NCBI-ProteinID:
XP_007694447
JGI:
Cocsa1_204886
UniProt:
M2SP55
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MASGRKPEARTSQPGRKSHNSALMDEDARAVAEFTQRATQQYGRGDRIRPKSVKDKKLRA
NVKSLESKNKQAAIEAKTVEVLLENNAGLLEPENELERTYRVRQDEVKREVGLETAKKGF
ELRLDDLGPYDVCEYSRNGRDLLIAGRKGHVATFDWRAGKLGCELQLNETVRDARWLHTS
NQKNFAVAQKKCVYIYSGDGVEMHQLKNHSEATHLEYLPYHFLLASVSTAGIIRYTDVST
GQSLPQLYTKLGPATAFAQNPQNAILNVGHQKGLVTLWSPNSATPLVKLLPHRGPVRSIA
MDRSGTYMVSTSQDRRMSVWDIRMFKEMHQHHLRVPGTTLSISDRNLTAVGYGTQVSIYK
DDIFQRSPEDQSQPKMPYMGWGGQGLDVGRVRFCPFEDVLGISHDRGFSSIIVPGSGEPN
PDSLEPGTNPYETSKQRRETEVHALLEKLQPEMIALDPNFVGNLDLTSHEERQKEYRAQR
GEREPDKVDLLKKRGKGRNSALRRYLRKNGNRNVIDAEKERAREALKNMQKRQIERKEKM
KKEYGPALERFARK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggacgtaagcctgaagccaggacttcgcaaccggggcgcaagtcgcacaac
agcgcactcatggacgaagacgcccgcgcagtcgcagaattcactcagagagctacacaa
caatatggccgcggcgaccggatacggccgaaatcagtcaaagataagaagctgcgggca
aatgtgaagtcgctcgagtcgaagaacaaacaggcggcgatagaagcaaagactgtcgaa
gtcctgcttgagaacaatgctggactgctggagccggagaacgagttggaaagaacatat
cgcgttcggcaagacgaggtcaagcgggaggttggcctagagacggcaaagaaagggttc
gagttgcggctagatgaccttgggccgtacgacgtgtgcgagtacagtcgcaatgggcgc
gatttgttgattgcgggccggaaaggccatgtcgcgacgtttgactggagagccggaaag
ctgggctgcgaactacaactcaacgagacggtgcgtgatgcgcgatggctgcatacaagc
aaccagaaaaactttgccgttgcacagaaaaaatgcgtgtacatctactcaggcgatggt
gtagaaatgcaccagctcaagaaccattcggaggcgacgcatctcgaataccttccgtac
cacttcctcctggcctcagtatcaacagcaggcatcataagatacacagacgtttcgacc
ggtcaatcgctgccacagctctacaccaaacttggccctgccacagcgttcgcgcaaaat
ccacaaaacgcaatcctcaacgttggccaccaaaagggtcttgtcacactatggtcgccg
aatagcgccactcccctcgtcaagctcctcccacaccgtgggcctgtacgaagcattgcc
atggacagatcaggcacctacatggtcagcacttctcaagaccggcgcatgtccgtgtgg
gacattcgcatgtttaaagaaatgcaccagcaccacctgcgtgtcccaggcaccactctc
tccatttccgatcgcaaccttacggctgtaggctacggaacccaagtctctatctataaa
gacgacattttccaacgcagccccgaagatcagtcacaacccaagatgccctatatggga
tggggcggccagggcctcgatgttggccgcgtccgcttctgtcctttcgaagatgtactc
ggcatatcgcacgaccgtggcttctcctccattattgttcccggatccggagaacccaac
cccgattccctcgaaccgggtaccaacccctatgaaacctccaagcaacgccgcgaaacc
gaagtccatgccctcctcgagaagctccaacctgagatgattgcgctcgaccccaacttt
gtgggtaaccttgatctgacgtcgcacgaggagcggcaaaaggagtaccgcgcgcagcgg
ggtgagcgcgaaccagacaaggtggatctgctgaagaagaggggcaagggaaggaactcg
gcgctgaggagatatctgaggaagaatggcaacagaaatgttattgatgcagaaaaggaa
cgcgcacgcgaggcgctcaagaatatgcaaaagaggcagattgagcgcaaggagaagatg
aagaaggagtacggtcctgcgctcgagcgatttgcgaggaagtag
DBGET
integrated database retrieval system