Bipolaris sorokiniana: COCSADRAFT_206223 Help Entry COCSADRAFT_206223 CDS       T03124                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism bsc  Bipolaris sorokiniana Brite KEGG Orthology (KO) [BR:bsc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bsc03021]     COCSADRAFT_206223 Enzymes [BR:bsc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      COCSADRAFT_206223     5.6.2.5  RNA 5'-3' helicase      COCSADRAFT_206223 Transcription machinery [BR:bsc03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      COCSADRAFT_206223 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 AAA_30 Viral_helicase1 UvrD-helicase DEAD nSTAND3 ResIII Annexin Motif Other DBs NCBI-GeneID:  19134323 NCBI-ProteinID:  XP_007694527 JGI:  Cocsa1_206223 UniProt:  M2TK88 LinkDB All DBs Position Unknown AA seq 1974 aa AA seqDB search MAEILEKINELRELPEDQHLFCPRIGDDGSVYYDEDIAAYPPETDPAELEDRRIKIQAAE ERKWTALKATEILAFDGEEAAPHKEWLISRLNHLMQSCDVCVRVFHQSRAEWRTRLLDSY DEENIGPFLEVVDAQCLQRIHKGLDEAAEILCKAEPKTRSVRLLPNECTYGFFEALSCDA LIRNEELLQKHFDAPFDMVQTKKRLKIQTYLPAMTRFLFSRVERRQKWATESWSTFKRNM LKSEWDWAVRDYVTSAMMKIQMYNLDISMVPLFWSGARLIVAKMDRDLITESLRGLDGDF YRLMLDHLSLKSEGFLDLIATMKQLLEKSPVDYWDGMNAVTPSIATVVEQVFNSPVFNQI LLAAAEDKEQNMNNLHSAFGWIPPFLDSIKLANLGPAVRPFAQALLGRFQSDKYPQKSRE YCYREGLKVLDYAFRKMGEGKTIDRFVGQPTVNSMLDVLSTYIQALVVNLKRFKASKEDQ GDFQLALSVIEHAFKLEAQSLIIERQLISAKQPSPTETPPSSPIWKTVLKAIGPDSLELA THMLIAGRGLIGLEPLQMKSGVDKVPPTVRHFNDRFRLLSQSITDVVEKMSEFEPSLLQA LFGQQPAASAIVSLMFSSTEDTRNSAIELLKVISGEEERRGALQHILKAHYRHVVRGISD SVRQVRLKKAFSPVPSMIRSCNDIIDIICNTQDGILRGREYESGDAAATMNLWENLWDSL TMIFATTEAWSNLGFYDKAMMMDFCRDTMQFADVLFDQCSIFVTALKPPSTDDEETTSKT QLLKELLARPANAMEGLARWLRLRDEFLSSKSVTLISKLLVRLHRVSIEIDAETLSYMER VLSGDVRAKLSDTQQAELQQALEEHLGRPLVKEEEPVKPKQVSISKWMAPGATSSSPADA KAKLLASMTSGSSKFQERREQMRAAEKAAQKAAEDKKNATQAEFKRKRQLDKEKREREKA AAVAKAKAARGITAEAGSGLEGLGVLGKDQAAKGEGLMHSSDESSDEEGDIDEDLFGIKK ERVKAGPRTNIVNEVKIQMPTKKKRAQRSAKDMRARLAPDLSSLHRTILSWNYFHEGDFP PKSRPELYSKVLNTFRTPNDYQNTFEPLLTLEAWQGFVKAREENQARPYEIRITSRAAVD MFQEIGSTMTHVENREVFISEGDIILFSQSKNPSAEEPTCLARVFRVKRKQQHIEVSYRV VPGNPLNSALQPNNTLLGTKLQSITPLEREYGALKGLQYYDLCDEIIRAKPSPLLTYKDS QIQPLISNYNVNTAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAILSDSLRNRGT TISVPGQQRSEAASKKLLVCAPSNAAVDELVMRFKDGIKTLNGESRKVNIVRLGRGDAIK ASVQDVTLEELVNQRLGVDPSDSKDKEATQKLFQDHKKISDQLKQAYQQRDSGEVKGDAA AKLEEDINALRRQKTALGTKIDNVKDDEKLASRNADLNRRRAQEAVLNEAHVICATLSGS GHEMFQGLSIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEAARF QYEQSLFVRMQKNHPNDVHLLDTQYRMHPEISLFPSQTFYDSRLLDGGDMAGLRKQPWHQ SMVLGPYRFFDVKGQQAAAPKGHSLINVAEIKVAMQLYKRLTSDYPDYDFKGKVGIITPY KSQLRELKQSFMQVYGQSIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRR MNVGLTRAKSSLWVLGNSESLQRGQYWNKLIVNAKERNRFTDGDVPKMLNQHSSKFPAPK EGYVQPNRPTPEVKPEVKSEPMSRSGSNQSGSTSSSSDAKHIKQEIKQEIKQEIKAEHKL VQHTKRKLDQEPNGVDSLKLESSDVEMDDIASDAASTPMNGGSGRSTPALADPSRQNPTT TSTDATNGSGATNGSTVPLPTDVIGGMSMAKPKIRRRPREPANPFIKNKKPRTG NT seq 5925 nt NT seq  +upstreamnt  +downstreamnt atggcggaaatactcgagaagataaacgagcttcgagagctgcccgaagaccagcatctc ttctgtccccgcatcggcgacgatgggtctgtttactacgatgaagacatcgccgcctac ccaccggaaaccgaccccgccgaactcgaagatcgcaggataaagatccaggcagccgag gagcggaaatggacggcactcaaggcgacagagatattggcatttgatggagaggaagca gcaccacacaaggaatggctaattagccggctcaaccacctgatgcagagctgcgatgtc tgtgtgagggtcttccatcagtccagagccgagtggcggacacgtctactcgactcgtat gacgaggagaacatcggcccatttctagaggtggtggatgctcaatgcttgcaacgaata cacaagggcctggatgaggcggccgagatcctttgtaaagccgaaccgaaaacacgctca gtacgactgctgccgaacgaatgcacttatggcttcttcgaagccttgagctgcgatgca ctaatacggaacgaggagctcctccagaaacactttgacgctcccttcgacatggttcaa acgaagaaacgattaaagattcagacataccttccagccatgacgcgcttcttgttcagc agggtcgagcggcgccaaaaatgggcgacggagtcgtggtctactttcaagcgcaatatg ttgaagtctgagtgggattgggctgtgcgggactacgtcacaagtgccatgatgaagatt cagatgtacaacctcgacatctccatggtacctcttttttggagtggcgcgcggctcatc gttgcaaagatggacagagatctcattaccgaatccttgcgagggctcgacggagatttc taccggctgatgctcgatcacctttcactgaaatcagagggcttcttggacttgattgcg acaatgaagcaactgctcgaaaagtctccagtcgactactgggacggcatgaatgcggtt accccatctattgcaacggtagtcgaacaagtgttcaacagtcccgttttcaaccaaata ctcttagcagcggcggaagataaagagcagaatatgaataacctccattctgcctttggc tggataccgccttttcttgactcgatcaagctggcaaatcttggaccagcagttcggcct tttgctcaagcgctccttggccgctttcaatcagacaaatacccgcaaaagtctcgggaa tactgctacagggaaggtcttaaagtactggactatgcattccgcaaaatgggagaaggc aagactattgatagatttgttggccagcccaccgtcaacagcatgcttgacgtgctatct acctacatacaggcacttgtcgtgaacttgaagcgtttcaaggcaagtaaagaggatcaa ggggactttcaattagcactctcggtcattgagcatgctttcaagctcgaggcacagtct ttgatcatcgagaggcaattgatctctgcgaagcagccatcgcccactgagacaccaccg tccagtcccatctggaagactgtcttgaaggcgattggccccgacagcttagaacttgca acgcatatgctcattgccgggaggggcctgatcggccttgaaccactgcagatgaagtca ggtgtggacaaagtgcccccgacggtgcgccatttcaacgatcgctttaggttgttatct caatctattaccgatgtcgtggagaagatgtctgaatttgagcccagcttgctgcaagcg ctgtttggccaacaacccgcagccagcgcaattgtctcgttgatgttctcatccacggag gatacccgcaactccgctattgagcttttgaaggtcatcagtggagaagaagagcgccgc ggggcactgcaacacatactaaaggcccattacagacatgtcgtgcgaggtatctcagat tcagtgcggcaggtcaggttgaagaaggcattttctcctgtgcctagtatgatcaggtct tgcaacgacatcatcgacatcatttgcaatactcaggacggtatcttgcgtggccgagaa tacgaatccggagacgccgcggcgacgatgaacctgtgggagaacctttgggactcgctc actatgatctttgcaacgaccgaagcctggagtaatttgggcttctatgacaaggccatg atgatggatttttgcagagacactatgcaatttgctgatgtcctgtttgaccagtgcagc attttcgtgactgccttaaaacctccttccacagatgatgaagagaccacgtcaaaaact cagttgctgaaagagcttctagcacgacctgcgaatgctatggaaggtctggcaagatgg ttgcgtctccgcgatgagttcttgtcgagtaaatccgttaccttgatcagcaagctactt gtcaggttacaccgggtatccattgagattgatgctgaaacgctctcgtacatggagcgc gtgctttcaggagatgtgcgcgcgaagctcagcgatacgcagcaggctgagctgcaacag gctttggaggagcatctcggacgcccgcttgtcaaagaagaagagcctgttaagcccaag caagtttccatcagcaaatggatggctcctggtgctacttcatcgtcaccagctgatgcc aaagccaagttgcttgctagtatgacttctggatctagcaagttccaagagcgacgagag cagatgagggctgcagaaaaagccgcgcagaaggcagctgaagacaagaagaatgctacg caagccgagttcaaacgcaagcggcaattagacaaggagaaacgcgagagggagaaggcc gctgcggttgccaaggccaaagcagctaggggcatcactgctgaagctggttctggactg gaaggtttgggagtcttgggcaaagatcaggctgcaaagggcgaaggcttgatgcattca tctgacgagtcgtcagatgaagagggagacattgacgaagacctctttggcattaagaaa gaaagggtcaaggccggacccagaacaaacattgtcaacgaagtcaaaattcaaatgccg acgaagaagaagagggctcaaagatctgccaaggacatgcgcgctcgtttggcacctgat cttagtagcttacatcgtactatcctcagctggaactactttcacgaaggcgactttccg ccaaagtcaagaccagagctgtattccaaggtccttaacaccttccgcacacccaacgac taccaaaatactttcgagccgcttctaacccttgaagcgtggcaaggctttgtcaaagct cgcgaggagaaccaagccaggccgtacgagatacgcatcacatcgcgagctgccgtcgac atgttccaggagattggtagcactatgacacatgtcgagaacagggaagtgttcatctct gaaggtgacattattctcttttcgcagtccaagaatccctcggctgaggagccgacttgc cttgccagagtattccgcgtgaagcgaaagcaacagcatattgaagtctcataccgcgtt gtaccaggcaacccgctcaactcggcgctgcagccaaacaacactctgctcggtaccaag ctgcagtccatcactcctctggaacgtgaatatggtgcgctcaagggtcttcagtactac gatctatgcgatgagatcattcgggcgaaaccatctcctcttctcacctacaaggatagc cagatccagccgctcatctctaactacaatgtcaacactgcacaagcgaaagccatcaag tcagctattgataatgatgcattcactttgatccaaggtccccctggttctggaaagacc aagaccattactgccattgtaggagctatcctcagtgacagccttcgcaatcgtggcacc actatttctgttcccggtcagcagcgatcagaggctgcgtcaaagaagttactggtctgt gcgcccagtaacgcagccgttgatgagttggtgatgcgtttcaaggacgggatcaagacg ctgaatggcgagtcgcgcaaagtcaacattgtgcgtttgggacgaggtgatgctatcaag gccagtgtgcaggatgtgacacttgaggagcttgtcaaccagcgattaggtgtcgatcca tcggacagcaaggataaagaggcaacgcaaaagcttttccaggaccacaagaagatctca gaccagctcaagcaagcttaccagcagcgagactctggcgaggtcaagggtgacgctgcc gccaagcttgaagaagacatcaatgctctacgcaggcaaaaaacggctctcggaacaaag attgacaacgtaaaagacgatgagaagcttgccagccgtaatgccgatctcaaccgacga agggctcaggaagcagttttgaacgaggcacacgtcatttgtgcaacgctgagcggatcc ggtcacgaaatgttccagggtttgagcattgagtttgaaaccgttattgttgacgaagcc gcccagtgtgttgagatgagcgcactcattcccctcaagtacggatgtgccaagtgtatc ttggtcggagatccgaagcaattgcctccaacagtcttttctaaagaagcggcgcgcttc cagtacgaacagagtttgttcgtccgcatgcagaagaatcatccaaatgatgtgcatttg ttagacacacagtaccgtatgcatccggaaatcagtttattccccagtcagacattttac gatagcagactgttagatggtggcgacatggctgggcttcgcaagcagccgtggcatcaa agcatggtccttggaccatatcgctttttcgatgtcaaaggtcagcaggcggctgcgcca aagggtcattcgcttatcaacgttgctgagatcaaagttgcaatgcaactgtataagcga ctgacctctgactaccccgactacgacttcaagggcaaagtcggcatcattacgccttac aagagtcagttgcgtgagctgaagcagagtttcatgcaggtgtatggccagagcattatc gaagacattgatttcaacaccacggacgctttccagggccgtgaaagcgaagtcatcatt ttctcctgcgtgcgagcctctccagcaggtggcattggtttccttcaggatatccgtcgt atgaacgtcggtcttacgcgtgctaaatcatctctctgggttctcggtaactctgaatcg cttcagcgaggacagtattggaacaagctgattgtgaatgccaaagagaggaaccggttt actgatggtgacgttccaaagatgctgaaccagcattcgagcaagttccctgcaccaaag gaaggatacgtgcagcccaaccggcctacacccgaagtcaaaccagaagtcaagtctgag cccatgagcagatcgggaagcaaccagtctggcagcacctcatccagctcagacgcaaag cacatcaagcaagaaattaagcaggaaatcaaacaagaaatcaaagccgagcacaagctc gtccaacacaccaagcgcaaactggaccaagaacccaacggcgtagacagccttaaacta gaaagcagcgatgtcgaaatggacgatatcgcctccgacgccgcctcgacccctatgaac ggcggcagcggccgctcaaccccagctctcgccgacccatcccgccaaaaccccacaaca acaagtacagacgcgaccaacggcagcggcgccacaaacggtagtaccgtcccacttcca accgacgtcataggaggcatgtccatggctaaacccaaaatacggcgtcgtccccgcgaa cccgcaaatccttttatcaagaataagaaaccaaggactgggtaa

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