KEGG   Bipolaris sorokiniana: COCSADRAFT_214409
Entry
COCSADRAFT_214409 CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03020  RNA polymerase
bsc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    COCSADRAFT_214409
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCSADRAFT_214409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsc03021]
    COCSADRAFT_214409
   03400 DNA repair and recombination proteins [BR:bsc03400]
    COCSADRAFT_214409
Transcription machinery [BR:bsc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     COCSADRAFT_214409
  RNA polymerase III system
   RNA polymerase III
     COCSADRAFT_214409
  RNA polymerase I system
   RNA polymerase I
     COCSADRAFT_214409
DNA repair and recombination proteins [BR:bsc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      COCSADRAFT_214409
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 19134465
NCBI-ProteinID: XP_007695053
JGI: Cocsa1_214409
UniProt: M2TM91
LinkDB
Position
Unknown
AA seq 146 aa
MADAQVFEETFNITSINNEKYDRVSRIFGTSTDSQITMTLDINHELFPVTVGESISLVLA
TTLALDGNSKGENDTMWRNVGKQGVATLADMYDYVCYGKNYRMEGGNGDTIKYFASFGGL
LLYMEGPHRKLSGLKIDDIYMLVKHS
NT seq 441 nt   +upstreamnt  +downstreamnt
atggccgacgcccaggtcttcgaagagacgttcaacatcacgtccattaataacgagaaa
tatgatcgtgtctcccgcatctttggcacctcgaccgacagccaaatcaccatgaccctc
gatattaaccacgagctgtttcccgtaacggttggcgagagcatcagcctggtcctagcc
acaacactcgccctcgacggcaactcaaagggcgagaatgacacaatgtggagaaacgta
ggcaaacagggtgtggcgacgctggcggatatgtatgactatgtctgctacggcaaaaac
taccgtatggaaggaggcaatggagataccataaaatactttgctagtttcggcgggctt
ttgctgtacatggaaggaccccaccgcaagctcagcggactgaaaattgacgacatctac
atgcttgtgaagcactcatag

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