Bipolaris sorokiniana: COCSADRAFT_22033
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Entry
COCSADRAFT_22033 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSADRAFT_22033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_22033
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
COCSADRAFT_22033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Roughex
Motif
Other DBs
NCBI-GeneID:
19134575
NCBI-ProteinID:
XP_007694084
JGI:
Cocsa1_22033
UniProt:
M2SRH2
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MADESDDDLYGDESATQQNKDADKAEDNSSGDEPMDEESGDDDDDDDDSDSDIDIIIEKA
PAPAKPAASQQPQESKAIKIEAPPPSTTPSQQPPPKTGPATGGTIPQISVSALSGTAFPA
QRTSTIDVNGNPVYPPQGKEILSVDIDADLAEEHKIWRRPGEDQSDYFNYGFDEFTWELY
RQRQVAMANTIQGQKNDMAQMQAMMGGGPMPGMPGMGGAPQGNGGPGGAPPSGPGGGGGG
GGGAGGGGAMGPGGMNEQQMQMMMQEMMAQGMDPSQMDFASFMQMAGQGMGGFPTGPGGQ
QGAGFQQGHQGGGGRGGRGARGRGW
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgagtccgacgatgacctgtatggggacgagagtgcgacgcagcagaacaag
gacgcagataaagccgaggacaattcaagcggtgacgagcccatggacgaggagtcgggc
gacgacgacgacgacgacgacgacagcgattctgacatcgacatcatcattgagaaggcg
ccagcaccagctaagcccgctgcctcacagcagccccaagaatccaaagccataaagatc
gaggcaccgccgccttcgactacaccttcacagcaaccccctccaaaaaccgggcctgca
acaggcggcaccatcccccagatttctgtctctgccctctcaggcaccgcctttcctgcc
caacgtacctcgacaatcgatgtcaatggtaatcccgtctatccgccccagggaaaagag
attctgtctgtcgatattgatgccgaccttgcagaagagcacaagatttggcgccggccg
ggcgaggaccagtccgactacttcaactatggtttcgacgaattcacatgggagctatac
aggcagcgtcaggtagccatggcaaataccatacagggccagaagaacgacatggcgcag
atgcaggccatgatgggcggtggtcctatgccaggcatgccaggcatgggaggcgcccca
cagggtaatggaggaccaggcggcgcccccccgtctggccctggtggcggcggaggcggc
ggtggtggtgctggcgggggcggagccatgggtcctggtgggatgaatgaacagcaaatg
caaatgatgatgcaagagatgatggcacagggcatggacccgagccagatggactttgcg
tccttcatgcaaatggctggtcagggcatgggaggcttccctaccggacctggtgggcag
cagggcgccggattccagcaaggccatcaaggcggtggtgggaggggcggccgaggtgcg
aggggaaggggctggtaa
DBGET
integrated database retrieval system
