Bipolaris sorokiniana: COCSADRAFT_22904
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Entry
COCSADRAFT_22904 CDS
T03124
Name
(RefSeq) polysaccharide lyase family 1 protein
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COCSADRAFT_22904
Enzymes [BR:
bsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
COCSADRAFT_22904
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
19134735
NCBI-ProteinID:
XP_007695375
JGI:
Cocsa1_22904
UniProt:
M2T1S7
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MKYSIFAAIAAALATAVSAADGVKGAAEGFAKGVTGGGSAAPVYPKTNAELISYLGDNQA
RTIVLTKTFDFTGSEGKVTSAGCRPWGTGSACQIAINKDGWCDNYQKTAPKVPSITYDKA
GVIGITVGSNKSLVGQGNKGVIKGKGIRMANGVKNIIIQNVRFTEINPQFVWGGDAITVD
GGDMIWIDHVTTDLIARQHIVLGEKASGRVTISNNEINGATAWSATCDGHHYWGIYLTGS
NDMVTLKGNYIHHTSGRSPKVAGNTLLHAVGNYFYANSGHAFEADAGAKIVAEGNAFQNV
KSASQSGLAGKVFASGGAACKSGLGRNCEANIYGSSPVMAGSDSSIIGSFSGKNIAAAVS
GANAKNVVNTAGYGRI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaagtactctatctttgccgctattgcggcagctctcgctaccgctgtcagcgctgct
gatggcgttaagggtgctgctgagggtttcgccaagggtgtaactggtggtggcagcgcc
gcccctgtctaccccaagaccaacgctgagctcattagctacctcggtgataaccaggcc
cgcaccattgtcctcaccaagaccttcgacttcactggcagtgagggtaaggtcacctct
gctggttgccgtccctggggcactggctccgcatgccagattgccatcaacaaggacgga
tggtgcgacaactaccagaagaccgcgcccaaggtccccagcatcacttatgataaggct
ggtgttattggtatcactgttggctccaacaagtctcttgtcggtcagggcaacaagggt
gttatcaaaggaaagggtatccgcatggccaacggcgtcaagaacatcatcatccagaac
gtccgtttcaccgagatcaaccctcagttcgtctggggtggtgatgccatcaccgtcgac
ggcggcgacatgatctggatcgaccacgtcaccaccgacctgattgcccgccagcacatt
gtcctcggcgagaaggcttccggtcgtgtcaccatctccaacaacgagatcaacggcgcc
accgcctggtccgctacctgcgacggccaccactactggggaatctatctcaccggcagc
aacgacatggtcaccctcaagggcaactacatccaccacacctctggccgctcaccaaag
gtcgccggtaacaccctcctccacgctgtcggcaactacttctacgccaactccggtcac
gctttcgaggccgacgccggtgccaagattgtcgctgagggcaatgccttccagaacgtc
aagtccgcgtctcagtctggtcttgccggcaaggtctttgcttctggtggtgccgcttgt
aagagcggtcttggccgcaactgcgaggccaacatttacggttcttcccctgtcatggct
ggctctgacagcagcatcattggtagcttctctggaaagaacattgccgctgccgtgtct
ggtgccaacgctaagaacgttgttaacactgctggttacggaaggatctaa
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