Bipolaris sorokiniana: COCSADRAFT_232766
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Entry
COCSADRAFT_232766 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03013
Nucleocytoplasmic transport
bsc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSADRAFT_232766
03015 mRNA surveillance pathway
COCSADRAFT_232766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_232766
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCSADRAFT_232766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
19134812
NCBI-ProteinID:
XP_007702875
JGI:
Cocsa1_232766
UniProt:
M2SXM3
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPARSGTSSSSMHTATSFGSSFLDASPTRLSPNRSSLRPHRESLIRDPYESPNRKLALEF
NLRLSISDSQFNEKLDQDAAERAKRHAEQLAYAAEEHERVFRTAKLEVERLALEEEQARL
RHEENQRREIERLREQKAREEEQAHRRALEAKQREEEAARQAAEHQKKLQEAEARIKAQR
EQEAAAERQQKEKAEADRKAAEAAAAAEKARQQAPQQPAPQPAAAPVQVAAPKPATSAPA
PASNFEQLHNQYLQLHQRMKEFRKAFWEEHKKPSSPLKGPVGDARRALRTRLGQINVERK
DSAAAIKRLRTECFDVALTTPGPMIDIRPYIVSHQIPQLANENDAAYPAFLLYVWICFEK
FLVKQFEKEAANTDGRIIQEIGLIAASLFGDQKYMWNSLPLTDIALAKFHKACPPLFGIR
GTMDTKEGRLRLGWRPDSTPESYSQRMRGIGAGYASMSLRSFASKTPAIATSEYWRAIVS
ICNTPPDQLWPGHFAILSGLVRDYYKKFIQFYGVPARAVLRRAVIDLPARAPPRCKDAAS
TIAVLHENWKRENLSLE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccagatcgggtacatcgtcttccagcatgcatactgcgacttcgtttggttcg
agtttcctggatgcttctccgacacgcctatcgccgaaccgaagcagcctgcgccctcac
cgcgagtcccttatccgtgacccttacgaaagccctaatcgaaaacttgcgctcgagttt
aatctccgacttagtatctcggacagtcagtttaatgagaagctcgaccaagatgcagcc
gagcgggctaagcgacacgccgaacaactggcctacgcggccgaggaacacgagcgcgtt
tttcgcaccgcaaagctagaggtcgagcgactggccttggaagaggaacaggctcgtctc
cgccacgaggaaaaccagcggagggagattgagcgactgcgcgagcaaaaggcccgcgaa
gaggaacaggcgcatcggagagctctcgaagcaaagcagcgcgaagaggaagccgcccgc
caggctgctgagcatcaaaagaagcttcaggaggcagaggcaaggatcaaggctcagcgg
gagcaagaggctgcagccgaaaggcagcaaaaagaaaaagcagaggccgatcgaaaagct
gccgaggccgcagcagctgctgagaaagctcgccagcaagctccacaacaaccagcacca
cagcccgccgccgcgcctgtccaagtagctgcgcccaagccggcgaccagtgcaccagcg
ccagccagcaattttgagcaattgcacaaccaatacctccagctccaccagcgcatgaag
gagttccgcaaggcattctgggaggaacataaaaagccatcctcgcccctcaagggccca
gttggtgacgctcggcgcgccctccgcactcgacttggtcagatcaacgttgagcgcaaa
gacagcgccgccgctatcaagcggctccgaacagagtgctttgacgtcgccttgacaaca
ccagggcccatgattgatatccgcccatatatcgtttcgcaccagatcccgcaactagcc
aacgaaaacgacgccgcataccctgccttcctgctttacgtttggatctgctttgaaaag
ttccttgtcaaacaattcgaaaaggaggcagcaaacacagacggccgtatcatccaagag
attggcctaatcgcagccagtctgtttggtgatcaaaagtacatgtggaacagcctccca
cttaccgatattgccctggccaagttccacaaggcctgtccgcctctattcggtattcgt
ggcaccatggatacaaaggaaggccggttacggctaggatggagaccagactctacccca
gaatcatactctcagcgtatgcgcggtatcggcgccggttatgcgtccatgtctctccgc
tcatttgcatccaagacccctgcgatagccacgtcagagtactggagagcaattgtttcc
atctgcaacaccccgcccgaccagctctggcctggccatttcgccattctcagcggcctg
gttcgcgactactacaaaaagttcatccagttctacggcgttcctgctcgcgcagtgtta
cgtcgcgctgtcatcgacctcccagcccgtgcgcctccgcgttgcaaagacgctgctagc
actattgctgtactacacgaaaactggaagagagaaaacctttcgctcgagtag
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integrated database retrieval system