Bipolaris sorokiniana: COCSADRAFT_244591
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Entry
COCSADRAFT_244591 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
COCSADRAFT_244591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bsc04121
]
COCSADRAFT_244591
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_244591
Ubiquitin system [BR:
bsc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
COCSADRAFT_244591
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
COCSADRAFT_244591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
F-box-like
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
F-box
Beta-prop_Nup120_160
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_EIPR1
PQQ_2
WDR54
Motif
Other DBs
NCBI-GeneID:
19135085
NCBI-ProteinID:
XP_007703898
JGI:
Cocsa1_244591
UniProt:
M2QZW3
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MYRRQSILSHRPKTSSDVDAESSSCAANTTNFGSHSTPSSANTTTNNTHATANNTNNTTT
PIPSSPPHTMKRTISQTFPAPYHSDIKDTNMLDAVNEATMSIDGSSQHSQTSSFSRAFGA
VAGSFTRQKTRRRMSSVSSPTPAQRRRGSIHSLFESLPSSSSALSKPSADQPRMPLVHQD
SGIPVFQMQPQSASSSSKAFAPFRRLSSMRRRPNASSSSADMTKTVFAAPVSYPSQAIPG
TAARQAAAAANQDRQNQLRREQEHTRSFLDGLIPSSRDDDIKDNESGVDMTCASPIVRAD
SVTEKKMIDPFQRLPAELATTVLSNLDAASLVRAERVSRSWNEHAASPHVWRNVFLRKHE
PEVHVSPAPIQMGGLGTGKMAGGNPAPAQDWKKMFQARATIDARWKAGTPAAIYLNGHTD
SVYCCQFDENKAITGSRDRTIRVWDLQTYKCIKVYGGPNHRPTANTPPPMEERPERVISN
ASMNGTKIGNDIYTVPADYHDASILCLQYDSEIMVTGSSDYTCIVWDITGEEYVPMYRLR
GHEAGVLDVCLDDKYIISCSKDAMIKVWDRKTGSCLRTLKGHRGPVNAVQLRGNFLVSAS
GDGVAKLWNLETGVSIKDFPSEDRGLAAVEFSDDAKYVLAGGNDHVVYKFDASTGELVHS
RVKHDGLVRSLFLDAFNGRIVSGSYDQSIQVSDYETGQTYAVYKNWTTSWILSAKSDYRR
VVATSQDGRTLILDFGHNVPGSELLVGSK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcaggcagtctatcctgtcgcatcgacccaaaacctcttccgacgtagacgct
gaatcctcctcctgcgctgccaacaccacgaactttggaagccactccacccccagcagc
gccaataccaccaccaacaacacacacgccactgctaacaataccaacaacaccacgacc
cctatcccttcatcgccgccccacacaatgaagcggaccatttcacagaccttcccggcc
ccctatcattccgatatcaaggacaccaacatgctcgacgcagtgaacgaagccacaatg
tccattgacggctcttcacagcactcgcagacaagctccttctcgcgcgcctttggtgcc
gttgccggaagcttcacacgccagaagacacgcaggcgaatgtcgtcagtctcttcgccg
acacctgcacagcgccgccgcggttccattcactccctcttcgagtccctgccctcgtcg
agctcagcattgtccaagcccagcgccgatcaaccacgcatgcccctggtgcaccaagac
tctggaatccccgtcttccaaatgcagccacaatccgcctcgtcgagctcaaaggccttt
gctccctttcggcgactgagcagcatgcgccgccgccccaatgcttcttcatcgtcagcc
gacatgacaaagactgtctttgccgccccagtctcgtaccccagccaagccattcccggc
accgcagcacgacaagcggccgccgctgccaaccaggaccgacaaaatcagcttcgccgc
gagcaagagcacacgcgaagctttctcgatggccttattccttcatcgcgtgatgacgac
ataaaggacaacgagagcggcgtggacatgacgtgtgcatcgcctattgttcgggcggat
agcgtcaccgagaagaagatgatcgatcccttccagcgtctcccagccgaactcgctacc
actgttctctccaacctcgacgctgcctcgcttgtccgtgctgagcgggtatcgcgcagc
tggaacgagcatgccgcgtcaccccacgtctggcgtaatgtcttcctccgcaagcacgag
cccgaagtacacgtctcacctgcgccaatccaaatgggcggcctgggcactggcaagatg
gcgggcggaaacccagcacctgcacaagactggaagaagatgttccaggcaagagccaca
attgacgcccgatggaaggcaggcacacctgctgccatttacttgaacggccacacagat
agcgtctattgctgccagtttgacgagaacaaggccatcaccggctcccgtgaccgcacc
atccgtgtgtgggacctccagacgtacaagtgcatcaaggtatacggcggccctaaccac
cgtccaaccgccaacacccctccacctatggaggagcgaccagagcgtgttatcagcaac
gcttcgatgaacggcacaaagattggcaacgacatctacacagtccccgctgattaccac
gacgcgtccattctttgcctccagtacgatagcgagatcatggtcactggttcttcagac
tacacttgcattgtttgggatatcacaggcgaggaatacgtccccatgtacaggctgcgt
ggtcacgaagctggtgttttggatgtctgcctcgacgataagtacatcatttcgtgctcc
aaggacgccatgatcaaggtctgggaccgcaagactggcagctgtctccgcactctcaag
ggccaccgaggccctgtcaacgctgtacagcttcgaggcaacttcctcgtctctgccagc
ggtgacggtgtagccaagctgtggaaccttgagactggtgtctcaatcaaggactttcca
tccgaagaccgtggccttgctgctgtcgagttttctgatgatgccaagtacgtgctcgcc
ggaggcaacgaccacgttgtctataagttcgatgcgtctaccggcgagcttgtgcacagc
agggtcaagcatgacggccttgttcgttcgcttttcctcgacgccttcaacggacgcatt
gtatcagggtcatacgaccagagcatccaagtctctgattacgaaaccggtcagacatat
gctgtatacaagaactggacaacgagctggattctatctgctaagagcgattataggcga
gttgtggctacgagtcaagacggccgaacgctgatcctggactttggccacaatgtgcca
ggatctgaactgctcgtcggatccaagtga
DBGET
integrated database retrieval system
