Bipolaris sorokiniana: COCSADRAFT_25892
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Entry
COCSADRAFT_25892 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_25892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_25892
Spliceosome [BR:
bsc03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
COCSADRAFT_25892
Complex B
COCSADRAFT_25892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
TRIP4_3rd
Motif
Other DBs
NCBI-GeneID:
19135396
NCBI-ProteinID:
XP_007699056
JGI:
Cocsa1_25892
UniProt:
M2SRL4
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MTHLLPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKIGGIAQYMDALREYKDNDGYVPTD
SWLQKRDRKKLEKKEKQEKLITEGVKNYKPSEDPKVQGDAFKTLFVSRLSYGITSDDLER
EFGRYGPIERIRIVEDITQPEDAPPKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV
LVDVERGRTVSGWRPRRFGGGLGGRGYTKGPSARGPGGAGGFGGAPAGPGGFGGRGGGFN
SGFGGRGGGRGGFGGDRGGFRGGSGGFGGGGRGGGGGGYGGGRGGIGYQSNGYGPPDGAP
AGPRGPRSGGFGGDRGSGGYGGDRGGGRHDDRRGGGNDRGSSGANNEPLGSRDRYRDSGY
GGSRDDGSRKRAYDGDSYDDPRTRRRY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacacatttactcccgccgatgctgttgaacctcttcgccccgcggccgccgctgcga
tgggttgaacctactgaccacgcgccagagaagcgttgcacccccaagattggcggcatt
gcgcaatacatggacgccctacgcgaatacaaggacaatgatggctacgtgcccaccgac
agctggctgcagaaacgcgaccgcaagaagctcgaaaagaaggagaaacaggagaagctt
attaccgaaggtgtcaagaattacaaaccctccgaagatccaaaggtacagggcgacgcc
ttcaaaacactcttcgtgtctcgtctatcctacggcatcacctctgacgacctcgagcgc
gagtttggtcgctacggtcccattgagcgtatccgcatcgtcgaagacatcacgcagcca
gaagacgcgccacccaagaagcgcaagcgcggttatgcctttattgtgttcgagcgtgag
aaggatatgaaggctgcctacaaagagacagatggcatcaagatcaaagaccgacgtgtt
ctagtcgacgttgagcgcggtcgcacagtttctgggtggcgtccacgtcgctttggtggt
ggccttggcggtcgaggttacacaaaggggccatctgcccgcggacctggtggcgcagga
ggttttggaggtgcccccgccggtcctggtggattcggaggccgcggtggtggcttcaac
agtggtttcggtggacgaggtggaggtcgtggaggctttggcggtgatcgaggaggtttc
cgaggtggaagtggaggctttggtggcggtggccgaggcggcggcggcgggggttacggc
ggtggacgaggaggtatcgggtaccaatcgaacggatatgggcctcccgatggtgctccc
gctggtcctcgtggtccccgaagcggcggtttcggtggcgaccgaggaagtggtggttac
ggaggcgatcgtggtggtggacggcacgacgatagacgtggcgggggtaacgaccgagga
tccagcggtgctaacaacgaaccgctcggcagcagggatcgataccgtgacagtgggtat
ggtggaagccgagacgatggctcgcggaagcgcgcgtacgatggtgacagctacgacgac
ccgcgaacacgacgaaggtactaa
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