Bipolaris sorokiniana: COCSADRAFT_26479
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Entry
COCSADRAFT_26479 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03030
DNA replication
bsc03410
Base excision repair
bsc03420
Nucleotide excision repair
bsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCSADRAFT_26479
03410 Base excision repair
COCSADRAFT_26479
03420 Nucleotide excision repair
COCSADRAFT_26479
03430 Mismatch repair
COCSADRAFT_26479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsc03032
]
COCSADRAFT_26479
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_26479
DNA replication proteins [BR:
bsc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
COCSADRAFT_26479
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
COCSADRAFT_26479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_16
AAA_22
AAA_33
RuvB_N
nSTAND3
AAA_14
AAA_28
AAA_18
NACHT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
19135505
NCBI-ProteinID:
XP_007699720
JGI:
Cocsa1_26479
UniProt:
M2RBU6
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MPADIRSFFGGGPPKPSQDSQKDEPAPKKAAPKKKGRTSRVVEDSDDDEEEAKPKKASPK
KPAAKKAKREPTPEPELEETTTSAFFGSSNKPKRTEPVKKKAAEAPKTTPKKAAAKPTGK
AANGKTSGRAKKPVTSYAERDDDDEFPDDDLDGADDIFGDDVKGKSKDDYQDASESDEDV
PIQLPHRGTPKAPAKQQKATKDEDEDEEEFDPDDEDVDMKDLDGDDDFDEEQAAKTKSKK
ISAASKKRKSPEHDEDEDEEDKPAKPKAKKAAPAKSPAKKKAKKDDVEDSADIQAIYDSI
PTVRAPTPPPKDPNGKFNWQANAGRGDAGPAQGSSADMPQGSDTCLAGLNFVFTGVLQKW
GRTESQELVKRHGGKVTTAPSKKTNYVVLGEDAGPSKLQKIRDMNIKTIDEDGLTLLIEK
LTAAGNKGDSKAQAVYAEKQRKEQEKIEKQAAELELEEKKRQKELKATAAAAGNKTASTV
TAAAQSAGPEVDSRLWTTKYAPTSLAHICGNKASVERLQRWLQAFPKSLKTGFKLAGKDG
SGVFRAVMIHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIEDGLRGVLSTNSLH
GYFAGDGKKVEDSKKKLVLIMDEVDGMSAGDRGGVGALAAVCKKTEVPMILICNDRRQPK
MKPFDYVTFDLPFRRPTIDQVRSRIMTIAFREGLKMPTPVINALIEGSHSDIRQVVNMIS
TAKIDQEVMDFDKGKAMSKNWEKHVVLKPWDITQKILGGGMFASSSKATLNEKIELYFND
HEFSPLMLQENYLGTNPILSGGYSGKEKNFKNLELVSQAADSISDGDLVDRMIHGSQQQW
SLMPTHAVFSFVRPASFVSGNTAGNQTRFTSWLGKNSSANKLSRMVKEIQAHMRLRSSGD
RHEIRQQYVPMLWTDLVQKLQKEGKEAVPEIIELMDSYYLTKDDFDAIMELGVGPMDQEK
VKIDSQAKSTFTRLYNQQSHPLPFMKASSVTAPKKQAKEKPDLEEAIEESDDGEVIEEIK
DEDDEDIDLSKDKYVKQPKKKAAPKKPAAAKKGAKKKAKDEDSEDEEDEDVKPKSKGKGK
AKAPAKGKK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgatattcgtagcttctttggtggtgggcccccgaagcctagccaggattcc
caaaaggatgagcctgcacccaagaaggctgcacccaagaaaaaaggtcgtacgagcagg
gttgtagaggactccgatgacgacgaagaggaggcaaagccgaagaaggcgtcaccaaag
aagccagccgctaagaaagccaaacgtgaaccaaccccagagcctgaactggaagaaacg
accacatctgcatttttcggtagctcgaataaacccaagcgaacagaacctgtaaagaag
aaggcagctgaggcaccaaagacaaccccaaagaaagcagctgcaaagccgactgggaag
gcagccaatggcaagacttctggacgtgcgaagaaacctgtcacatcgtacgctgagagg
gatgacgacgatgagtttccggatgatgatcttgacggtgcggacgatatctttggggat
gacgtcaagggtaagagcaaggacgactaccaggacgcttcagagagcgacgaagatgta
cccatacaactgccacatcgtgggacaccaaaagccccggcgaagcaacaaaaggcaacc
aaggacgaggacgaggacgaggaagagttcgaccccgacgacgaggatgtggatatgaag
gatctggatggtgacgatgactttgatgaggaacaagctgctaagactaaatcgaagaaa
atatcggctgccagcaagaaacgcaaatcccccgaacatgacgaagatgaggacgaagag
gacaagccggcaaagcccaaggcgaagaaggctgctccagcaaagtcaccagcgaagaag
aaggcgaagaaggatgatgtcgaggatagcgctgatattcaagctatctacgacagcata
cctaccgtgcgcgctccaacacctcctcccaaagacccgaatgggaaattcaactggcaa
gcaaatgcgggccgtggcgatgctggacccgcacaaggctcgtccgctgatatgccacaa
ggctcagatacctgccttgctgggctgaatttcgtcttcactggtgtgttgcaaaaatgg
ggtcgaactgagagtcaggagctggtcaagcgtcacggcggcaaagtgactaccgctccg
agcaagaagaccaattacgtcgtcttgggtgaagatgctggacccagcaagctgcagaag
atccgggacatgaacatcaagacaattgatgaggatggcctgactctgctgattgagaag
ttgacagccgcgggcaacaagggcgacagcaaagctcaggcagtgtatgcagagaagcag
cgcaaggagcaagagaagattgaaaagcaagctgcagagctcgagctagaggaaaagaag
cgtcagaaagaattgaaggctacagctgcggcggctggaaacaaaacagcctctaccgtc
actgctgctgctcaaagtgcaggcccagaggtcgactctcgattgtggacaaccaagtat
gcacccacgtcacttgctcatatatgcggcaacaaggcatcggtcgagaggttgcaacga
tggctgcaggctttcccgaagagcctcaagacagggttcaagcttgctggtaaagatggc
agcggagtcttccgcgccgtcatgatccatggaccgcctggtattggtaagactactgct
gcacatctcgttgctaagcttgaaggttacgacattgttgagaggaatgccagtgacacc
cgaagcaagaagcttattgaagatggtctgcgtggtgtcctcagtaccaactccctccac
ggctactttgcgggagatggaaagaaggttgaggactccaagaagaagctcgtacttatc
atggacgaggtcgatggtatgtctgcaggtgaccgaggtggtgttggtgcactcgcagct
gtttgcaagaagacagaagttcccatgatcctcatttgcaacgacaggaggcagcccaag
atgaagccatttgactatgtcacgttcgacctccccttccgacggccaactattgaccaa
gtgcgatcgcgtatcatgacgattgcgttccgtgaaggcctcaagatgcctaccccagtt
atcaacgctttgattgaaggcagccattccgatatccgccaagttgtcaacatgatatcc
actgccaagatcgatcaggaagtcatggactttgacaaaggcaaggccatgtcgaagaac
tgggagaagcatgtcgttttgaagccgtgggacatcacgcaaaagattcttggtggtggc
atgtttgcttcgagcagcaaggccactctcaatgaaaagattgagctctacttcaacgac
catgagttcagcccgctgatgcttcaggaaaattatctcggcacgaatcctatcctatcg
ggaggctattctgggaaggagaagaacttcaagaatcttgagcttgtgtcacaagcagca
gacagtatcagtgatggcgatctggtcgaccggatgattcacggatctcagcagcaatgg
agcttgatgcctacgcatgcagtcttcagttttgtgcgacccgcaagctttgtgtctggc
aatactgctggaaatcagacacgctttacatcgtggctgggcaagaacagctctgccaat
aagctcagtcgaatggtcaaggagatccaggctcatatgcggttgcgatcttctggtgat
cgacacgagatccgtcagcaatacgtcccgatgctttggactgatcttgttcagaagttg
caaaaggagggcaaggaggcagtcccagagattattgagttgatggacagctactatctt
accaaggacgactttgatgcaatcatggagctgggtgttggtcctatggaccaagaaaag
gtcaaaattgatagtcaggccaagtcaacctttactcgactatacaaccagcaatcgcat
cctctgcccttcatgaaggcttcatccgtcacggcgccaaagaaacaagccaaagaaaag
ccagacttggaagaagcgattgaagagtcggatgatggcgaagtgattgaggaaatcaag
gacgaagatgacgaggatatcgatctctcaaaggacaagtacgtcaagcaaccgaagaag
aaggctgcgcccaagaagccggctgcggcgaaaaagggggcgaagaagaaggccaaggat
gaagacagtgaggatgaggaggacgaggatgtcaagccaaagagtaagggtaagggcaag
gcgaaggctccagcaaagggaaagaagtga
DBGET
integrated database retrieval system
