Bipolaris sorokiniana: COCSADRAFT_264941
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Entry
COCSADRAFT_264941 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COCSADRAFT_264941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_264941
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
COCSADRAFT_264941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
RPN13_C
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
19135506
NCBI-ProteinID:
XP_007705728
JGI:
Cocsa1_264941
UniProt:
M2S823
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MKPFRPLTLTRPRPENGEPPSKKRRIGSNALSVGNRQPLNTMNNPAPAQFLPPGLEGNYY
TVLWRKHTTKKNKTWDGDGVLAVVGGYATLNDSETGKELGKGACSRPLLPGSTLSIGGRE
IEVENSMDKADYLSGRMFLGKVAAAPIQQPKRPEPGHKPLLSVKPNSKKGQETADDKEIV
PEYKLSAYRKQQFKAPLLSTTVMPQRNPSIPQPRHDPNAPNALIMKRPDSCPKGKQIVDV
VVDPVLSKHLRDHQREGVQFLYECVMGMRCEGEGAIMADEMGLGKTLQTITLLWTLMKQN
PIHDSPPLIKKALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNKKIANFTMGKSYNI
MIVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTASNKAMLAIQSLNTERRIILSGTPLQ
NDLGEFYTAIDFVNPGLLGQRSAFKRSFELPIMRSRQPDASEAELEKGEARWKELVSLTS
QFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAETYRAILGSPTFRLALGSTDIALQLINV
LKKVCNSPSLLKSSKDNDDTPSEMLQSIIPLIPSKILSSSASSAKLRLLDSLIHSIYTTT
EEKIVIVSNYTTTLDMIERLLVSLSYTFLRLDGSTPASKRQSLVEKFNKTPKTTSFAFLL
SAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLVQGGLDEKI
YQRQVMKMGLANAVVDNKASASSFSQEELRDLFRLDEREGCQTHDLLGCTCECRGKLEDT
LGATNEQSEEEVEEEEYPMLRKASEVNVEEQEAKIKARRAAKQPKLRMLMEYRHIDTKVL
KGMDKGADEGSAEDEVVDDLAVAVDDDVFLSVLKQPECNVGFLLTKSTS
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttccggcctctcaccctcacgcgcccacgtcctgaaaatggcgagccaccg
agcaagaaacgaagaattggatctaatgcactgtcggtgggcaaccgccaaccgctcaat
actatgaacaatccagcaccagcacaattcctacccccgggtctcgaaggaaattattat
acagtattatggcgaaaacatacgaccaagaagaataagacatgggacggagatggtgtt
cttgctgtcgtgggtggatacgctacgctcaacgacagcgagacggggaaagagctggga
aagggagcatgcagtcggccactactccccggatctactctttccattggtggaagagaa
atagaggttgagaattccatggataaggcagattacctttcgggacgcatgttcctaggc
aaggttgcggctgcaccaatacagcagccaaagcggcctgagccaggacacaagcctctg
ttatcggttaaaccaaattcgaagaagggtcaagaaactgccgacgacaaggagattgtg
cccgagtacaagctctcggcttatcgcaagcagcaattcaaggcaccgttgctatctacc
accgtcatgccgcagcgcaacccgtcaattccgcaaccccgtcacgacccaaatgcaccc
aacgccctcattatgaaacgacctgattcatgtcccaaaggaaagcaaatagttgatgta
gttgtcgacccagtcctcagcaagcacctccgagatcaccaacgcgagggtgtacaattt
ttgtacgaatgcgttatgggtatgcgatgcgagggcgagggtgctatcatggctgacgag
atgggcttgggtaaaacgcttcagaccatcacacttctctggacactgatgaagcagaat
ccgatacatgattcccctcctcttatcaagaaagccctaatcgtctgtccagctggtcta
gtagataattggaaacgtgagttccgcaagtggctcggcaatgagagagtcggtgtgttc
gtattggatgcaaagaacaagaagattgccaacttcaccatgggcaagtcttacaacatt
atgattgtcggatacgagatgcttcgtatcgttcaagaagagctgaagaagggcagcggt
gtcgatatcgtcattgcagacgagggtcataggttgaaaacagcgagcaataaggccatg
cttgctatccagtctctgaacacggagaggcgcatcattctgtctggtactccgttacag
aacgatcttggcgagttctatactgccatcgattttgtcaaccctggactcctcggacaa
cgatccgccttcaagcgatcgttcgagctgcccattatgcgtagtcgtcagccggacgca
agcgaagcagaacttgaaaaaggcgaggcacgctggaaggagcttgtatctctgactagt
cagttcatgatccggcggacagcagaagtcctttcgaaatacctaccgccgaaaactgag
cacattgtcttctgcaggcccaccaaaggacaagcggagacctaccgcgctattctcggc
tcgccaacattcagacttgcgctgggtagtacggatattgcgctgcagctcatcaacgtg
ctgaagaaagtctgcaacagcccttcattactcaaatcgtccaaggacaatgatgacacg
ccatctgagatgcttcagtccatcatcccactcatccccagcaaaatcctcagttcaagc
gcttcaagcgcaaagttgcgactactcgacagcctcattcactccatctataccacgacc
gaagaaaaaatcgtcatagtctcaaactacacaacaacactagacatgattgagcgcctc
ctcgtatccctttcctacaccttcctccgtctcgacggcagcacacccgcctcgaagcgc
cagtccctcgtcgagaagttcaacaaaacccccaaaacaacctcgttcgccttcctcctg
tccgccaaatccggcggtgtaggtctcaacctcattggcgcctcgcgcatcgtgctcttc
gacatcgactggaaccccgccaccgacctgcaagccatggcccgcatccaccgcgacggc
cagaagctaccgtgcaaagtctaccgcttcctcgtgcagggcggtctcgacgagaaaatc
taccagcgccaagtcatgaaaatgggcctcgccaacgcagtcgtagataacaaagcctcc
gcatcctccttttcccaagaagaactccgcgatctgtttcggctagacgagcgcgagggg
tgccagactcacgatttactcggctgcacgtgcgagtgtcggggcaagctcgaggatacg
cttggtgctacaaatgaacagtctgaagaagaggtggaagaagaggaatacccgatgctt
cgcaaagctagcgaggttaatgtcgaggagcaggaggcgaagattaaggcgaggcgcgcg
gcgaagcaaccgaagttgaggatgttgatggagtatcggcatattgataccaaggttctt
aagggtatggataagggtgctgacgagggaagtgcagaagatgaggtagtggatgatttg
gcggtcgcggtggatgatgatgttttccttagtgtcttgaagcaaccggagtgtaatgtg
gggtttctgcttaccaagtcgacgtcgtag
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