Bipolaris sorokiniana: COCSADRAFT_279575
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Entry
COCSADRAFT_279575 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_279575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_279575
Spliceosome [BR:
bsc03041
]
Complex B
Other components
Prp19-related factors
COCSADRAFT_279575
Complex C
COCSADRAFT_279575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
19135784
NCBI-ProteinID:
XP_007705928
JGI:
Cocsa1_279575
UniProt:
M2QTI6
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MTNVPKSDNETSNTTAPEKMAEESSTVAPSQTTADEEAPSTTMAANETSADNTPTGQESA
VKEDAVATTAIPSDPKAALAARMARFKALQAQKVSGRKATEREVRDAEDRSARLAQISKL
SAAHDKASYKLLKSEDPDFERKRNWDYTIEESESWDKRLKKKAKNREGVAFADYRNEANK
VYKRQIGQMNKVDMEAYAEEKARKLQSQVSSGLLQLVETDAGEIYTVDSQGRINTPVDEA
YSHDHKPSKEAVDRLVEDLEKSERSRLKARAARGIRDEQDMGDVTYINQKNKQFNDKLAR
FYNRYTTEIRESFERGTAI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgtacctaaatcagataacgagacgtccaatactaccgcccctgaaaaaatg
gccgaagaatcctccaccgtcgcaccatcgcaaaccacagcggacgaagaagcgccctcg
accaccatggccgcaaacgaaacatcagcagataacacaccgacaggccaggagtctgct
gtgaaagaagatgcagttgctaccacggcgataccatctgaccccaaagccgctctcgct
gcgcgaatggcacgcttcaaggcgctccaggcgcaaaaagtcagcggccgaaaagccaca
gagcgtgaagtccgcgacgccgaagaccgtagtgcgcgtcttgcacagatttccaagctc
agcgccgcccacgataaagcctcgtacaagcttctcaagtccgaagaccctgacttcgag
cgcaagcggaactgggattacaccatcgaagagagcgagagctgggacaagcggctaaag
aagaaggccaagaacagggaaggcgtagcctttgccgactataggaacgaagcaaacaaa
gtatataagcggcaaatcggccaaatgaacaaagtagacatggaagcctacgccgaagaa
aaggccagaaaacttcagtcccaagtatcctccggcctcctccaactcgtcgaaaccgac
gccggcgaaatctacaccgtcgacagccaaggtcgcatcaacacgcccgtcgacgaagcc
tacagccacgatcataagcccagcaaagaagctgtggaccgcctcgtagaggacctcgag
aagagcgagcgctctcgcttaaaagcgcgtgccgcgcgcggcatacgtgacgagcaggat
atgggcgatgtcacgtatattaatcagaagaacaagcagttcaacgacaagctggcgagg
ttttataatcggtacacgacggagattcgcgagagctttgagcgggggacggctatataa
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