Bipolaris sorokiniana: COCSADRAFT_28737
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Entry
COCSADRAFT_28737 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03030
DNA replication
bsc03082
ATP-dependent chromatin remodeling
bsc03410
Base excision repair
bsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCSADRAFT_28737
03410 Base excision repair
COCSADRAFT_28737
03420 Nucleotide excision repair
COCSADRAFT_28737
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCSADRAFT_28737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsc03032
]
COCSADRAFT_28737
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_28737
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_28737
Enzymes [BR:
bsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COCSADRAFT_28737
DNA replication proteins [BR:
bsc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
COCSADRAFT_28737
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
COCSADRAFT_28737
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
COCSADRAFT_28737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
TAFII28
BUD22
CENP-X
Motif
Other DBs
NCBI-GeneID:
19135903
NCBI-ProteinID:
XP_007702537
JGI:
Cocsa1_28737
UniProt:
M2SWM2
LinkDB
All DBs
Position
Unknown
AA seq
242 aa
AA seq
DB search
MPPRKSNVSAVSNEPSPVAPRSAPRDDSLGVEDLNLPKSIVQRLAKGVLPPNTQIQKDAL
LAMSKSATVFVNYITSCAAEKALSNGKKTVMPKDVFDAMQELEFAFMLPRLEAEVTKFTS
IQADKRNTYRKKVREEKKASSSTGGAIGSTPTKLTADGDVVMEEADDDGERAAKRARRES
GDNAEGDVTEEEGDETADIEDEEVEDDEIEEEVEEERLVEDPLEEKENREDDDDDEDGND
SD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaggaaaagcaacgtatccgccgtgtcaaatgaacccagtcccgtagcacca
agatcagcgccgcgggatgacagtctgggtgtcgaggatctgaacttgcccaaatcgata
gtgcagcgtctggccaagggtgtgctgccgccgaatactcagatccaaaaagatgcgcta
cttgccatgagcaagagtgcaaccgtgttcgtcaactacattacatcatgcgccgccgag
aaagccctcagcaacggcaagaaaaccgtcatgcccaaggacgtcttcgatgccatgcaa
gaactcgaattcgctttcatgttgccccgtcttgaagccgaagtcacaaagttcacgagc
atacaagccgacaaacggaacacttataggaaaaaggttcgcgaggagaagaaggcatca
tcgtcaactggaggtgcaataggatcgacgcctacgaaactaacggcggatggagacgtc
gtcatggaagaggcagatgacgatggagagagggcagcgaagagggcaaggcgagagagc
ggggataacgccgagggagatgtcactgaagaagagggggatgagacagcagacatcgag
gacgaggaagtcgaagatgatgagattgaagaggaggtagaagaggagcgcttggtagag
gatccgcttgaagagaaggagaacagagaggacgatgacgacgacgaagatggcaacgat
agtgactga
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