Bipolaris sorokiniana: COCSADRAFT_29340
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Entry
COCSADRAFT_29340 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
COCSADRAFT_29340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_29340
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
COCSADRAFT_29340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
19136032
NCBI-ProteinID:
XP_007703035
JGI:
Cocsa1_29340
UniProt:
M2SW42
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MSSGRPVVHQDYIAKIRYSNALPPPPCPPKLLDIPNTGLSSGQYTSAGFASRLAREQSLN
IEADAELGMPIDLVGIPKVFDGDESAIQAMPHPPPLSAADKALMRPPNALGKSTSHVSGA
TFLRRTEYVTASTTGGSKFESSNSSNTMRLRRKRKQVETSLDDPTNISRHILKGFNIAYP
ADAYNGQDNAENIRAAESTPEERLAWNKPKHPRNPNLKLLDSYPLLPDWDATPDTGGYMV
FKFTAPPINNPLDPSYDPRLDVALLRPAGQTIQDQERYMEDLQAHKLDPTVPPPIARYQF
EFFLPSDKSKVRGIKRNFTTYDPTNEADIDFDIAEDDEGQPRKCFKYDNIRTYETSQQVG
DPSDTYGDVVALALHDPEKHESEPLRDTKLQKAAYFYPITQRTSLRPRRPGRVDMTEEQP
KVDIIEAAGKDPESFERREMYRKRAEGMEIGE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagctccggacgcccagtcgttcaccaggactacattgcgaaaatcagatattcgaat
gcgctgcctccaccaccatgtccgcccaagctgctagacattcccaacaccggcctctcg
agcgggcagtatacgtcggcgggctttgcatctaggcttgcgcgagagcaatcgctgaac
attgaagctgatgctgagctgggtatgcccatcgatctggtcggtattcccaaagtattc
gatggagatgagtctgctattcaggctatgccccacccaccgccgcttagtgccgcagat
aaggcgctgatgcgaccgccaaatgcgcttggaaagagtaccagccacgtctcgggcgct
accttcttgcggcgaacggaatacgttaccgcaagtaccactggcggttctaagttcgaa
tcgagtaactcgtccaatactatgcgcctgcgtaggaagcggaagcaagtagagacgtcc
ctcgatgatcctacaaacatctcgcgacatattctcaagggcttcaacattgcctaccca
gcagatgcgtacaacggacaggacaatgcagagaatattagggcggcagagtcgacacct
gaagagcgactggcgtggaacaagcccaagcaccccaggaaccccaatctcaagctgctc
gactcgtacccgcttcttccagactgggacgctacacccgatactggcggatacatggtt
ttcaagttcaccgcaccacccattaacaacccactcgacccctcgtacgacccacgactt
gatgtcgctcttcttcgtcccgccggtcagaccatccaagaccaagaacgatacatggaa
gacctccaagcacacaaactcgacccaacagtcccaccacccattgcacgctatcaattt
gagttcttcctgccctcagataagagtaaagtccgcggcatcaagcgcaacttcaccaca
tacgaccccaccaacgaagccgacatcgactttgacattgccgaagatgacgaaggccag
cctcgcaagtgcttcaaatacgacaacatccgcacctacgagacatcgcaacaagtcggt
gaccccagcgatacttatggcgatgtcgtcgcccttgccctacacgaccctgagaaacac
gaatctgaacccctgcgcgacaccaaattgcaaaaggcagcgtacttttaccccattact
caacggacgagcttgaggccgagacgacctggtcgcgttgatatgacggaggaacagccc
aaggtagatattattgaggctgcgggtaaagatccggagtcgtttgagaggagggaaatg
tacaggaagagggccgagggcatggagattggggagtag
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