KEGG   Bipolaris sorokiniana: COCSADRAFT_29340
Entry
COCSADRAFT_29340  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K15174  RNA polymerase II-associated factor 1
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc04011  MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04011 MAPK signaling pathway - yeast
    COCSADRAFT_29340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsc03021]
    COCSADRAFT_29340
Transcription machinery [BR:bsc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     COCSADRAFT_29340
SSDB
Motif
Pfam: Paf1
Other DBs
NCBI-GeneID: 19136032
NCBI-ProteinID: XP_007703035
JGI: Cocsa1_29340
UniProt: M2SW42
LinkDB
Position
Unknown
AA seq 452 aa
MSSGRPVVHQDYIAKIRYSNALPPPPCPPKLLDIPNTGLSSGQYTSAGFASRLAREQSLN
IEADAELGMPIDLVGIPKVFDGDESAIQAMPHPPPLSAADKALMRPPNALGKSTSHVSGA
TFLRRTEYVTASTTGGSKFESSNSSNTMRLRRKRKQVETSLDDPTNISRHILKGFNIAYP
ADAYNGQDNAENIRAAESTPEERLAWNKPKHPRNPNLKLLDSYPLLPDWDATPDTGGYMV
FKFTAPPINNPLDPSYDPRLDVALLRPAGQTIQDQERYMEDLQAHKLDPTVPPPIARYQF
EFFLPSDKSKVRGIKRNFTTYDPTNEADIDFDIAEDDEGQPRKCFKYDNIRTYETSQQVG
DPSDTYGDVVALALHDPEKHESEPLRDTKLQKAAYFYPITQRTSLRPRRPGRVDMTEEQP
KVDIIEAAGKDPESFERREMYRKRAEGMEIGE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgagctccggacgcccagtcgttcaccaggactacattgcgaaaatcagatattcgaat
gcgctgcctccaccaccatgtccgcccaagctgctagacattcccaacaccggcctctcg
agcgggcagtatacgtcggcgggctttgcatctaggcttgcgcgagagcaatcgctgaac
attgaagctgatgctgagctgggtatgcccatcgatctggtcggtattcccaaagtattc
gatggagatgagtctgctattcaggctatgccccacccaccgccgcttagtgccgcagat
aaggcgctgatgcgaccgccaaatgcgcttggaaagagtaccagccacgtctcgggcgct
accttcttgcggcgaacggaatacgttaccgcaagtaccactggcggttctaagttcgaa
tcgagtaactcgtccaatactatgcgcctgcgtaggaagcggaagcaagtagagacgtcc
ctcgatgatcctacaaacatctcgcgacatattctcaagggcttcaacattgcctaccca
gcagatgcgtacaacggacaggacaatgcagagaatattagggcggcagagtcgacacct
gaagagcgactggcgtggaacaagcccaagcaccccaggaaccccaatctcaagctgctc
gactcgtacccgcttcttccagactgggacgctacacccgatactggcggatacatggtt
ttcaagttcaccgcaccacccattaacaacccactcgacccctcgtacgacccacgactt
gatgtcgctcttcttcgtcccgccggtcagaccatccaagaccaagaacgatacatggaa
gacctccaagcacacaaactcgacccaacagtcccaccacccattgcacgctatcaattt
gagttcttcctgccctcagataagagtaaagtccgcggcatcaagcgcaacttcaccaca
tacgaccccaccaacgaagccgacatcgactttgacattgccgaagatgacgaaggccag
cctcgcaagtgcttcaaatacgacaacatccgcacctacgagacatcgcaacaagtcggt
gaccccagcgatacttatggcgatgtcgtcgcccttgccctacacgaccctgagaaacac
gaatctgaacccctgcgcgacaccaaattgcaaaaggcagcgtacttttaccccattact
caacggacgagcttgaggccgagacgacctggtcgcgttgatatgacggaggaacagccc
aaggtagatattattgaggctgcgggtaaagatccggagtcgtttgagaggagggaaatg
tacaggaagagggccgagggcatggagattggggagtag

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